RNA–Protein interactions for RNA: ENST00000615676.1

YTHDF3-208, Transcript of YTH N6-methyladenosine RNA binding protein 3, human

TSL 1 (best)

Gene YTHDF3, Length 5,092 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YTHDF3-208	ENST00000615676	HEBP1	Q9NRV9	189 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	ACSS1	Q9NUB1	689 aa	Predicted RBP	12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	CNOT2	Q9NZN8	540 aa	Known RBP	12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	LSM5	Q9Y4Y9	91 aa	Known RBP	12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	NSG1	A0A0A6YYJ2	146 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	FAM171A2	A8MVW0	826 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676		A8MXE2	369 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	PKLR	P30613	574 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	YPEL5	P62699	121 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	NKPD1	Q17RQ9	610 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	OR4K15	Q8NH41	348 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	NPRL2	Q8WTW4	380 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	MSI2	Q96DH6	328 aa	Known RBP	12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	ZNF681	Q96N22	645 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	SSX3	Q99909	188 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	TREX1	Q9NSU2	369 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676		B4DXG7	233 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	ONECUT3	O60422	494 aa	Predicted RBP	12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	CNMD	O75829	334 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	CPM	P14384	443 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	CD46	P15529	392 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	CX3CR1	P49238	355 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	EFNA3	P52797	238 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	CLDN2	P57739	230 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	FCRLB	Q6BAA4	426 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	FNDC9	Q8TBE3	224 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	CPT1C	Q8TCG5	803 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	MALSU1	Q96EH3	234 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	PDLIM5	Q96HC4	596 aa	Known RBP	12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	NGB	Q9NPG2	151 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	TEX10	Q9NXF1	929 aa	Predicted RBP	12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	RICTOR	Q6R327	1708 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	OR6C6	A6NF89	314 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	SHOX	O15266	292 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	SEC14L2	O76054	403 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	RPL23A	P62750	156 aa	Known RBP	12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	STK11	Q15831	433 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	C5orf46	Q6UWT4	87 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	TECPR1	Q7Z6L1	1165 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	ACPT	Q9BZG2	426 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	PRMT8	Q9NR22	394 aa	Predicted RBP	12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	HCFC1R1	Q9NWW0	138 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	USP36	Q9P275	1121 aa	Known RBP	12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	RHBDD3	Q9Y3P4	386 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	CACNG2	Q9Y698	323 aa		12.81	□□□□□ -0.36
YTHDF3-208	ENST00000615676	LRRC37A3	O60309	1634 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	GABRR3	A8MPY1	467 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	ZNF701	M0R085	212 aa	Predicted RBP	12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	GPX3	P22352	226 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	CTBS	Q01459	385 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	SF3A2	Q15428	464 aa	Known RBP	12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	ANKRD54	Q6NXT1	300 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	FAM180B	Q6P0A1	224 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	ST6GALNAC5	Q9BVH7	336 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	SAP130	Q9H0E3	1048 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	CSNK1G1	Q9HCP0	422 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	TES	Q9UGI8	421 aa	Known RBP	12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	AK6	Q9Y3D8	172 aa	Known RBP	12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	IFT172	Q9UG01	1749 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	C17orf113	A0A1B0GUU1	675 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	ANKRD33B	A6NCL7	494 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	NUDT21	O43809	227 aa	Known RBP	12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	TFPT	P0C1Z6	253 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	GAA	P10253	952 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	EPHA1	P21709	976 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	DRD5	P21918	477 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	ETV6	P41212	452 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	ERVK-25	P63136	954 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	CLVS2	Q5SYC1	327 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	CNIH2	Q6PI25	160 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	DPY19L4	Q7Z388	723 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	ZNF595	Q8IYB9	648 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	PIANP	Q8IYJ0	282 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	OR2T35	Q8NGX2	323 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	OR14A16	Q8NHC5	309 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	ZFAND1	Q8TCF1	268 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	DCUN1D4	Q92564	292 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	TCTN2	Q96GX1	697 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	TOX2	Q96NM4	488 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	ADO	Q96SZ5	270 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	SLC46A2	Q9BY10	475 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	LRIT1	Q9P2V4	623 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	FBXO7	Q9Y3I1	522 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	ACTL7A	Q9Y615	435 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	PHRF1	Q9P1Y6	1649 aa	Known RBP	12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676		A0A087WUU8	490 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	TRBV11-1	A0A0K0K1C0	115 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	FAM230A	A0A1W2PPH8	454 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676		H3BQ06	376 aa	Predicted RBP	12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	LDB3	O75112	727 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	C1orf105	O95561	183 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	DCN	P07585	359 aa	Known RBP	12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	RRAS2	P62070	204 aa	Predicted RBP	12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	OR52D1	Q9H346	318 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	AOAH	P28039	575 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	LPAL2	Q16609	132 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	PKDCC	Q504Y2	493 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	ACSM3	Q53FZ2	586 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	MFSD6L	Q8IWD5	586 aa		12.8	□□□□□ -0.36
YTHDF3-208	ENST00000615676	OR51Q1	Q8NH59	317 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms