RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 VASNQ6EMK4 673 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 USP53Q70EK8 1073 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 C11orf74Q86VG3 221 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 GID4Q8IVV7 300 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 DEPDC7Q96QD5 511 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 SDF2Q99470 211 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 ZNF350Q9GZX5 532 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 FN3KQ9H479 309 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 PPP1R3EQ9H7J1 279 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 HINT3Q9NQE9 182 aaKnown RBP13.63□□□□□ -0.23
CDH1-213ENST00000612417 SLC7A7Q9UM01 511 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 ENTPD2Q9Y5L3 495 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 USP34Q70CQ2 3546 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 CCDC182A6NF36 153 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 GABRPO00591 440 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 GCGRP47871 477 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 SNRPNP63162 240 aaKnown RBP13.62□□□□□ -0.23
CDH1-213ENST00000612417 PYDC2Q56P42 97 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 FBXO42Q6P3S6 717 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 ZNF322Q6U7Q0 402 aaPredicted RBP13.62□□□□□ -0.23
CDH1-213ENST00000612417 RANBP3LQ86VV4 465 aaPredicted RBP13.62□□□□□ -0.23
CDH1-213ENST00000612417 RNF113BQ8IZP6 322 aaKnown RBP13.62□□□□□ -0.23
CDH1-213ENST00000612417 ZFP41Q8N8Y5 198 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 BBS1Q8NFJ9 593 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 CAPSLQ8WWF8 208 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 OR2A5Q96R48 311 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 PRSS27Q9BQR3 290 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 UBQLN3Q9H347 655 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 TP63Q9H3D4 680 aaPredicted RBP13.62□□□□□ -0.23
CDH1-213ENST00000612417 DAPP1Q9UN19 280 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 SATB2Q9UPW6 733 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 TRAPPC13A5PLN9 417 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 FAM221BA6H8Z2 402 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 B4DXG7 233 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 PLA2G10O15496 165 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 IDH3BO43837 385 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 SDC3O75056 442 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 MTRF1O75570 445 aaKnown RBP13.62□□□□□ -0.23
CDH1-213ENST00000612417 PDGFBP01127 241 aaPredicted RBP13.62□□□□□ -0.23
CDH1-213ENST00000612417 PVRP15151 417 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 CELP19835 753 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 HNRNPKP61978 463 aaKnown RBP eCLIP13.62□□□□□ -0.23
CDH1-213ENST00000612417 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.62□□□□□ -0.23
CDH1-213ENST00000612417 WDR45BQ5MNZ6 344 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 FHL5Q5TD97 284 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 OOSP2Q86WS3 158 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 ATP6V1C2Q8NEY4 427 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 NEIL3Q8TAT5 605 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 COL26A1Q96A83 441 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 ZC3HAV1LQ96H79 300 aaKnown RBP13.62□□□□□ -0.23
CDH1-213ENST00000612417 SAMD8Q96LT4 415 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 DCLRE1CQ96SD1 692 aaKnown RBP13.62□□□□□ -0.23
CDH1-213ENST00000612417 SECISBP2Q96T21 854 aaKnown RBP13.62□□□□□ -0.23
CDH1-213ENST00000612417 ATF6BQ99941 703 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 PIGUQ9H490 435 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 TNFRSF10DQ9UBN6 386 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 ZNF223Q9UK11 482 aaPredicted RBP13.62□□□□□ -0.23
CDH1-213ENST00000612417 C19orf53Q9UNZ5 99 aaPredicted RBP13.62□□□□□ -0.23
CDH1-213ENST00000612417 SLC22A7Q9Y694 548 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 CSNK1G3Q9Y6M4 447 aa13.62□□□□□ -0.23
CDH1-213ENST00000612417 SCN2AQ99250 2005 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 FAM172BPA6NC97 362 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 URADA6NGE7 173 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 BCAT2O15382 392 aaPredicted RBP13.61□□□□□ -0.23
CDH1-213ENST00000612417 B3GALT2O43825 422 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 SLC2A10O95528 541 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 ZGLP1P0C6A0 271 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 NAT2P11245 290 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 CPMP14384 443 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 TLX1P31314 330 aaPredicted RBP13.61□□□□□ -0.23
CDH1-213ENST00000612417 NXPH1P58417 271 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 ZNF791Q3KP31 576 aaPredicted RBP13.61□□□□□ -0.23
CDH1-213ENST00000612417 LCN1P1Q5VSP4 162 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 FCRL6Q6DN72 434 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 CNIH2Q6PI25 160 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 CXXC5Q7LFL8 322 aaKnown RBP13.61□□□□□ -0.23
CDH1-213ENST00000612417 DGLUCYQ7Z3D6 616 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 MARCH9Q86YJ5 346 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 CPOQ8IVL8 374 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 ZNF619Q8N2I2 560 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 SIRT6Q8N6T7 355 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 C1orf216Q8TAB5 229 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 SPRYD4Q8WW59 207 aaPredicted RBP13.61□□□□□ -0.23
CDH1-213ENST00000612417 TMED9Q9BVK6 235 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 H2AFY2Q9P0M6 372 aaPredicted RBP13.61□□□□□ -0.23
CDH1-213ENST00000612417 PCDHGB7Q9Y5F8 929 aa13.61□□□□□ -0.23
CDH1-213ENST00000612417 TP53BP1Q12888 1972 aaPredicted RBP13.61□□□□□ -0.23
CDH1-213ENST00000612417 A0A087WV62 115 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 A0A0J9YY10 115 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 CENPVL1A0A0U1RR11 272 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 SMIM30A4D0T7 59 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 UNC119BA6NIH7 251 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 SOCS6O14544 535 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 P2RX6O15547 441 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 FMO6PO60774 539 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 CTSVO60911 334 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 DBIP07108 87 aaKnown RBP13.6□□□□□ -0.23
CDH1-213ENST00000612417 IFI6P09912 130 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 NID1P14543 1247 aa13.6□□□□□ -0.23
CDH1-213ENST00000612417 ZNF10P21506 573 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms