RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 CASP3P42574 277 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 SMIM11AP58511 58 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 EPS8Q12929 822 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 PRAMEF20Q5VT98 475 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 TBPL2Q6SJ96 375 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 LINC00696Q6ZRV3 163 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 HIPK1Q86Z02 1210 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 NR4A3Q92570 626 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 SLC41A3Q96GZ6 507 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 SLC29A1Q99808 456 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 LAT2Q9GZY6 243 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 VCXQ9H320 206 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 TMEM27Q9HBJ8 222 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 EXOSC3Q9NQT5 275 aaKnown RBP16.04■□□□□ 0.16
SREK1-216ENST00000612404 GPR83Q9NYM4 423 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 PDP1Q9P0J1 537 aaPredicted RBP16.04■□□□□ 0.16
SREK1-216ENST00000612404 ABI3Q9P2A4 366 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 NCOR2Q9Y618 2525 aa16.04■□□□□ 0.16
SREK1-216ENST00000612404 EIF4E2O60573 245 aaKnown RBP16.03■□□□□ 0.16
SREK1-216ENST00000612404 NUDT14O95848 222 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 CAPNS1P04632 268 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 ADRB1P08588 477 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 COPZ1P61923 177 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 ST3GAL3Q11203 375 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 MISPQ8IVT2 679 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 OFCC1Q8IZS5 231 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 PIK3C3Q8NEB9 887 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 ALPK1Q96QP1 1244 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 OSBPL11Q9BXB4 747 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 TRIM2Q9C040 744 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 RYDENQ9NUL5 291 aaKnown RBP16.03■□□□□ 0.16
SREK1-216ENST00000612404 RPS6KB2Q9UBS0 482 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 TMCC3Q9ULS5 477 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 SLC7A7Q9UM01 511 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 TRBV4-1A0A0J9YWV2 114 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 TRAPPC13A5PLN9 417 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 EI24O14681 340 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 PEX1O43933 1283 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 OR5F1O95221 314 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 CCL3P10147 92 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 CYB561P49447 251 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 HLCSP50747 726 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 CCL11P51671 97 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 C17orf67Q0P5P2 114 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 AGAP7PQ5VUJ5 663 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 SLC22A10Q63ZE4 541 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 IZUMO2Q6UXV1 221 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 RTL4Q6ZR62 310 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 GDF7Q7Z4P5 450 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 PACS2Q86VP3 889 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 OR4C15Q8NGM1 316 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 SGCZQ96LD1 299 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 DHRS1Q96LJ7 313 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 AGAP4Q96P64 663 aa16.03■□□□□ 0.16
SREK1-216ENST00000612404 IGF2RP11717 2491 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 A0A1W2PRQ8 180 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 UQCRBP14927 111 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 ELAVL4P26378 380 aaKnown RBP16.02■□□□□ 0.16
SREK1-216ENST00000612404 CASRP41180 1078 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 HMGA2P52926 109 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 GAS1P54826 345 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 DGCR6Q14129 220 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 DCST1Q5T197 706 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 MDGA2Q7Z553 956 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 B4GALNT2Q8NHY0 566 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 ZNF563Q8TA94 476 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 MAGEE2Q8TD90 523 aaPredicted RBP16.02■□□□□ 0.16
SREK1-216ENST00000612404 PAQR8Q8TEZ7 354 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 RNF138Q8WVD3 245 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 NRBF2Q96F24 287 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 SECISBP2Q96T21 854 aaKnown RBP16.02■□□□□ 0.16
SREK1-216ENST00000612404 POLR2J2Q9GZM3 115 aaKnown RBP16.02■□□□□ 0.16
SREK1-216ENST00000612404 POLR2J3Q9H1A7 115 aaKnown RBP16.02■□□□□ 0.16
SREK1-216ENST00000612404 SDHAF3Q9NRP4 125 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 MAN2C1Q9NTJ4 1040 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 PPP4R1LQ9P1A2 415 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 WIF1Q9Y5W5 379 aa16.02■□□□□ 0.16
SREK1-216ENST00000612404 ADAM10O14672 748 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 RASAL1O95294 804 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 ZNF26P17031 533 aaPredicted RBP16.01■□□□□ 0.15
SREK1-216ENST00000612404 PTGDSP41222 190 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 SLC6A8P48029 635 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 LIMS1P48059 325 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 IDH2P48735 452 aaKnown RBP16.01■□□□□ 0.15
SREK1-216ENST00000612404 TRAM2Q15035 370 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 COL28A1Q2UY09 1125 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 PPP4R4Q6NUP7 873 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 LSMEM1Q8N8F7 131 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 TOR1AIP2Q8NFQ8 470 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 SLC7A13Q8TCU3 470 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 GIPC3Q8TF64 312 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 DCBLD2Q96PD2 775 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 UTP23Q9BRU9 249 aaKnown RBP16.01■□□□□ 0.15
SREK1-216ENST00000612404 SMURF2Q9HAU4 748 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 ICAM5Q9UMF0 924 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 CACNA1AO00555 2505 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 EML6Q6ZMW3 1958 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 A0A1B0GWA3 101 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 G3V3Y1 287 aa16.01■□□□□ 0.15
SREK1-216ENST00000612404 CCNB2O95067 398 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms