RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 SUMO3P55854 103 aaPredicted RBP23.47■■□□□ 1.35
VEGFA-226ENST00000611736 CLDN15P56746 228 aa23.47■■□□□ 1.35
VEGFA-226ENST00000611736 DSTNP60981 165 aa23.47■■□□□ 1.35
VEGFA-226ENST00000611736 FOXF1Q12946 379 aa23.47■■□□□ 1.35
VEGFA-226ENST00000611736 CGB2Q6NT52 195 aa23.47■■□□□ 1.35
VEGFA-226ENST00000611736 EIF3MQ7L2H7 374 aaKnown RBP23.47■■□□□ 1.35
VEGFA-226ENST00000611736 GRAMD2AQ8IUY3 354 aa23.47■■□□□ 1.35
VEGFA-226ENST00000611736 MBD3L2Q8NHZ7 208 aaPredicted RBP23.47■■□□□ 1.35
VEGFA-226ENST00000611736 POC1BQ8TC44 478 aa23.47■■□□□ 1.35
VEGFA-226ENST00000611736 ARSGQ96EG1 525 aa23.47■■□□□ 1.35
VEGFA-226ENST00000611736 SLC38A1Q9H2H9 487 aa23.47■■□□□ 1.35
VEGFA-226ENST00000611736 CCDC134Q9H6E4 229 aa23.47■■□□□ 1.35
VEGFA-226ENST00000611736 SLAMF8Q9P0V8 285 aa23.47■■□□□ 1.35
VEGFA-226ENST00000611736 CLCF1Q9UBD9 225 aa23.47■■□□□ 1.35
VEGFA-226ENST00000611736 P2RX2Q9UBL9 471 aa23.47■■□□□ 1.35
VEGFA-226ENST00000611736 C7orf72A4D263 438 aa23.46■■□□□ 1.35
VEGFA-226ENST00000611736 CLIC1O00299 241 aa23.46■■□□□ 1.35
VEGFA-226ENST00000611736 SNRPB2P08579 225 aaKnown RBP23.46■■□□□ 1.35
VEGFA-226ENST00000611736 UBTFL6P0CB48 400 aaPredicted RBP23.46■■□□□ 1.35
VEGFA-226ENST00000611736 HOXB9P17482 250 aaPredicted RBP23.46■■□□□ 1.35
VEGFA-226ENST00000611736 MDH1P40925 334 aaKnown RBP23.46■■□□□ 1.35
VEGFA-226ENST00000611736 SKP2Q13309 424 aa23.46■■□□□ 1.35
VEGFA-226ENST00000611736 TOMM34Q15785 309 aaPredicted RBP23.46■■□□□ 1.35
VEGFA-226ENST00000611736 LRRC74BQ6ZQY2 392 aa23.46■■□□□ 1.35
VEGFA-226ENST00000611736 ADGRE4PQ86SQ3 457 aa23.46■■□□□ 1.35
VEGFA-226ENST00000611736 TOR1AIP2Q8NFQ8 470 aa23.46■■□□□ 1.35
VEGFA-226ENST00000611736 OR5W2Q8NH69 310 aa23.46■■□□□ 1.35
VEGFA-226ENST00000611736 GPR119Q8TDV5 335 aa23.46■■□□□ 1.35
VEGFA-226ENST00000611736 LAT2Q9GZY6 243 aa23.46■■□□□ 1.35
VEGFA-226ENST00000611736 RUBCNLQ9H714 662 aa23.46■■□□□ 1.35
VEGFA-226ENST00000611736 TMEM185BQ9H7F4 350 aa23.46■■□□□ 1.35
VEGFA-226ENST00000611736 SLC25A37Q9NYZ2 338 aa23.46■■□□□ 1.35
VEGFA-226ENST00000611736 HCFC1P51610 2035 aa23.45■■□□□ 1.35
VEGFA-226ENST00000611736 A0A1W2PP18 115 aa23.45■■□□□ 1.34
VEGFA-226ENST00000611736 OPN1LWP04000 364 aa23.45■■□□□ 1.34
VEGFA-226ENST00000611736 BMP5P22003 454 aa23.45■■□□□ 1.34
VEGFA-226ENST00000611736 PSMA4P25789 261 aaKnown RBP23.45■■□□□ 1.34
VEGFA-226ENST00000611736 ZNF136P52737 540 aa23.45■■□□□ 1.34
VEGFA-226ENST00000611736 ARFIP2P53365 341 aa23.45■■□□□ 1.34
VEGFA-226ENST00000611736 EEFSECP57772 596 aaKnown RBP23.45■■□□□ 1.34
VEGFA-226ENST00000611736 FGFBP1Q14512 234 aa23.45■■□□□ 1.34
VEGFA-226ENST00000611736 LRIF1Q5T3J3 769 aa23.45■■□□□ 1.34
VEGFA-226ENST00000611736 MSRB3Q8IXL7 192 aa23.45■■□□□ 1.34
VEGFA-226ENST00000611736 OIT3Q8WWZ8 545 aa23.45■■□□□ 1.34
VEGFA-226ENST00000611736 WNT2BQ93097 391 aa23.45■■□□□ 1.34
VEGFA-226ENST00000611736 UCN2Q96RP3 112 aa23.45■■□□□ 1.34
VEGFA-226ENST00000611736 STOML1Q9UBI4 398 aa23.45■■□□□ 1.34
VEGFA-226ENST00000611736 ABCA12Q86UK0 2595 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 CLDN24A6NM45 220 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 BCAS1O75363 584 aaPredicted RBP23.44■■□□□ 1.34
VEGFA-226ENST00000611736 BCHEP06276 602 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 EIF1P41567 113 aaKnown RBP23.44■■□□□ 1.34
VEGFA-226ENST00000611736 AGFG1P52594 562 aaKnown RBP23.44■■□□□ 1.34
VEGFA-226ENST00000611736 TFF3Q07654 80 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 CBFBQ13951 182 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 MAPK11Q15759 364 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 SLC25A35Q3KQZ1 300 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 METTL21CQ5VZV1 264 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 AP1ARQ63HQ0 302 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 P4HA3Q7Z4N8 544 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 GGNQ86UU5 652 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 FBXO27Q8NI29 283 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 ZNF524Q96C55 264 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 TM9SF2Q99805 663 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 THUMPD3Q9BV44 507 aaKnown RBP23.44■■□□□ 1.34
VEGFA-226ENST00000611736 PINK1Q9BXM7 581 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 RAD21L1Q9H4I0 556 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.44■■□□□ 1.34
VEGFA-226ENST00000611736 SLC35A3Q9Y2D2 325 aa23.44■■□□□ 1.34
VEGFA-226ENST00000611736 EIF1AYO14602 144 aaKnown RBP23.43■■□□□ 1.34
VEGFA-226ENST00000611736 DVL2O14641 736 aa23.43■■□□□ 1.34
VEGFA-226ENST00000611736 TGM6O95932 706 aa23.43■■□□□ 1.34
VEGFA-226ENST00000611736 TMIGD3P0DMS9 266 aaPredicted RBP23.43■■□□□ 1.34
VEGFA-226ENST00000611736 COX6B1P14854 86 aa23.43■■□□□ 1.34
VEGFA-226ENST00000611736 IL11P20809 199 aa23.43■■□□□ 1.34
VEGFA-226ENST00000611736 PGM1P36871 562 aa23.43■■□□□ 1.34
VEGFA-226ENST00000611736 KCNJ10P78508 379 aa23.43■■□□□ 1.34
VEGFA-226ENST00000611736 QPRTQ15274 297 aa23.43■■□□□ 1.34
VEGFA-226ENST00000611736 RGNQ15493 299 aa23.43■■□□□ 1.34
VEGFA-226ENST00000611736 RELL2Q8NC24 303 aaPredicted RBP23.43■■□□□ 1.34
VEGFA-226ENST00000611736 MARVELD3Q96A59 401 aa23.43■■□□□ 1.34
VEGFA-226ENST00000611736 ZNF845Q96IR2 970 aaPredicted RBP23.43■■□□□ 1.34
VEGFA-226ENST00000611736 MTHFD2LQ9H903 347 aaPredicted RBP23.43■■□□□ 1.34
VEGFA-226ENST00000611736 NPDC1Q9NQX5 325 aaPredicted RBP23.43■■□□□ 1.34
VEGFA-226ENST00000611736 VAPAQ9P0L0 249 aa23.43■■□□□ 1.34
VEGFA-226ENST00000611736 GPC6Q9Y625 555 aaPredicted RBP23.43■■□□□ 1.34
VEGFA-226ENST00000611736 DCHS2Q6V1P9 2916 aa23.43■■□□□ 1.34
VEGFA-226ENST00000611736 AGAP5A6NIR3 686 aa23.42■■□□□ 1.34
VEGFA-226ENST00000611736 SLC22A20A6NK97 555 aa23.42■■□□□ 1.34
VEGFA-226ENST00000611736 HNRNPRO43390 633 aaKnown RBP23.42■■□□□ 1.34
VEGFA-226ENST00000611736 NUDT7P0C024 238 aa23.42■■□□□ 1.34
VEGFA-226ENST00000611736 TFPTP0C1Z6 253 aa23.42■■□□□ 1.34
VEGFA-226ENST00000611736 PRKCAP17252 672 aa23.42■■□□□ 1.34
VEGFA-226ENST00000611736 ME2P23368 584 aa23.42■■□□□ 1.34
VEGFA-226ENST00000611736 CTSSP25774 331 aa23.42■■□□□ 1.34
VEGFA-226ENST00000611736 RPS3AP61247 264 aaKnown RBP23.42■■□□□ 1.34
VEGFA-226ENST00000611736 RAC1P63000 192 aa23.42■■□□□ 1.34
VEGFA-226ENST00000611736 GCNT2Q8N0V5 402 aa23.42■■□□□ 1.34
VEGFA-226ENST00000611736 FAM71CQ8NEG0 241 aa23.42■■□□□ 1.34
VEGFA-226ENST00000611736 SLC38A5Q8WUX1 472 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms