RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 HPXP02790 462 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 DUSP5Q16690 384 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 CNKSR3Q6P9H4 555 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 OR52E1Q8NGJ3 308 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 ABHD4Q8TB40 342 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 SOSTQ9BQB4 213 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 GTPBP2Q9BX10 602 aaKnown RBP18.97■□□□□ 0.63
SSBP3-216ENST00000610401 KCNN2Q9H2S1 579 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 METTL17Q9H7H0 456 aaPredicted RBP18.97■□□□□ 0.63
SSBP3-216ENST00000610401 FKRPQ9H9S5 495 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 CACYBPQ9HB71 228 aaKnown RBP18.97■□□□□ 0.63
SSBP3-216ENST00000610401 MDC1Q14676 2089 aaKnown RBP18.97■□□□□ 0.63
SSBP3-216ENST00000610401 A0A1B0GVT2 93 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 CXCL10P02778 98 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 EXOSC7Q15024 291 aaKnown RBP18.97■□□□□ 0.63
SSBP3-216ENST00000610401 ABHD17CQ6PCB6 329 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 SDR9C7Q8NEX9 313 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 OR4K13Q8NH42 304 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 OR10G6Q8NH81 332 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 PTP4A1Q93096 173 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 ZNF514Q96K75 400 aaPredicted RBP18.97■□□□□ 0.63
SSBP3-216ENST00000610401 C11orf49Q9H6J7 331 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 SLC6A20Q9NP91 592 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.97■□□□□ 0.63
SSBP3-216ENST00000610401 GLTPQ9NZD2 209 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 CA5BQ9Y2D0 317 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 ASB4Q9Y574 426 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 A0A1W2PP55 124 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 AHCYP23526 432 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 BTCP35070 178 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 ST3GAL2Q16842 350 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 ESCO2Q56NI9 601 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 ZBTB37Q5TC79 503 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 METRNLQ641Q3 311 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 CREB3L2Q70SY1 520 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 TRILQ7L0X0 811 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 KIAA1143Q96AT1 154 aaPredicted RBP18.96■□□□□ 0.63
SSBP3-216ENST00000610401 CD180Q99467 661 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 TRIM36Q9NQ86 728 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 PRDM7Q9NQW5 492 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 SIDT1Q9NXL6 827 aaKnown RBP18.96■□□□□ 0.63
SSBP3-216ENST00000610401 PRR23D1E9PI22 279 aaPredicted RBP18.96■□□□□ 0.63
SSBP3-216ENST00000610401 EMC8O43402 210 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 RGS11O94810 467 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 WNT1P04628 370 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 ZNF888P0CJ79 500 aaPredicted RBP18.96■□□□□ 0.63
SSBP3-216ENST00000610401 PRR23D2P0DMB1 279 aaPredicted RBP18.96■□□□□ 0.63
SSBP3-216ENST00000610401 DNASE1P24855 282 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 BICRALQ6AI39 1079 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 TEX261Q6UWH6 196 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 ZNF836Q6ZNA1 936 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 MED30Q96HR3 178 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 ZFP64Q9NPA5 681 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 IL20Q9NYY1 176 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 U3KQ87 197 aa18.96■□□□□ 0.63
SSBP3-216ENST00000610401 SLC22A5O76082 557 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 SOX30O94993 753 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 PER3P56645 1201 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 FXYD6P3P58550 94 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 HBMQ6B0K9 141 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 PSRC1Q6PGN9 363 aaPredicted RBP18.95■□□□□ 0.62
SSBP3-216ENST00000610401 CREB3L1Q96BA8 519 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 OR14A2Q96R54 314 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 SEMA4CQ9C0C4 833 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 DPAGT1Q9H3H5 408 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 PRKACBP22694 351 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 AK4P27144 223 aaPredicted RBP18.95■□□□□ 0.62
SSBP3-216ENST00000610401 HNRNPA1L2Q32P51 320 aaKnown RBP18.95■□□□□ 0.62
SSBP3-216ENST00000610401 PLA1AQ53H76 456 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 CD300LDQ6UXZ3 194 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 GET4Q7L5D6 327 aaPredicted RBP18.95■□□□□ 0.62
SSBP3-216ENST00000610401 THAP4Q8WY91 577 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 NDC1Q9BTX1 674 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 CYSLTR2Q9NS75 346 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 ZNF443Q9Y2A4 671 aaPredicted RBP18.95■□□□□ 0.62
SSBP3-216ENST00000610401 OR2W5A6NFC9 320 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 CISD3P0C7P0 127 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 ATF1P18846 271 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 ATF4P18848 351 aaPredicted RBP18.95■□□□□ 0.62
SSBP3-216ENST00000610401 SEC13P55735 322 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 SNTB2Q13425 540 aaKnown RBP18.95■□□□□ 0.62
SSBP3-216ENST00000610401 STARD5Q9NSY2 213 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 SLCO1C1Q9NYB5 712 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 GPR34Q9UPC5 381 aa18.95■□□□□ 0.62
SSBP3-216ENST00000610401 C17orf113A0A1B0GUU1 675 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 UNC119BA6NIH7 251 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 ACOD1A6NK06 481 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 SEC14L5O43304 696 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 SLC19A2O60779 497 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 RPP14O95059 124 aaKnown RBP18.94■□□□□ 0.62
SSBP3-216ENST00000610401 ANXA3P12429 323 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 LAMP2P13473 410 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 FRKP42685 505 aaPredicted RBP18.94■□□□□ 0.62
SSBP3-216ENST00000610401 SELENOPP49908 381 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 UBE2MP61081 183 aaKnown RBP18.94■□□□□ 0.62
SSBP3-216ENST00000610401 ELAVL3Q14576 367 aaKnown RBP18.94■□□□□ 0.62
SSBP3-216ENST00000610401 MRPL2Q5T653 305 aaKnown RBP18.94■□□□□ 0.62
SSBP3-216ENST00000610401 NIPAL3Q6P499 406 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 COMMD7Q86VX2 200 aa18.94■□□□□ 0.62
SSBP3-216ENST00000610401 LRRC28Q86X40 367 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms