RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 GIMAP2Q9UG22 337 aa11.92□□□□□ -0.5
POLR2J3-219ENST00000608621 LAMP3Q9UQV4 416 aa11.92□□□□□ -0.5
POLR2J3-219ENST00000608621 CARD8Q9Y2G2 431 aa11.92□□□□□ -0.5
POLR2J3-219ENST00000608621 TMEM114B3SHH9 223 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 GTPBP1O00178 669 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 SCAMP2O15127 329 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 TMCC2O75069 709 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 PEX11AO75192 247 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 PRKD3O94806 890 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 DDX5P17844 614 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 ALDH3A1P30838 453 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 ZNF844Q08AG5 666 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 CAPRIN1Q14444 709 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 RNPS1Q15287 305 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 ARL13AQ5H913 290 aaPredicted RBP11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 SFRP5Q5T4F7 317 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 FCRLAQ7L513 359 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 HOMEZQ8IX15 550 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 GABRG1Q8N1C3 465 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 ZNF527Q8NB42 609 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 LRRN4CLQ8ND94 238 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 GPR119Q8TDV5 335 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 RNF128Q8TEB7 428 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 OR5P2Q8WZ92 322 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 MDFIQ99750 246 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 ACTRT3Q9BYD9 372 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 CXorf36Q9H7Y0 433 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 ICAM5Q9UMF0 924 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 ACTL7BQ9Y614 415 aa11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 GPC6Q9Y625 555 aaPredicted RBP11.91□□□□□ -0.5
POLR2J3-219ENST00000608621 TLDC2A0PJX2 215 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 GJE1A6NN92 205 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 H3BNH8 94 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 NPHS1O60500 1241 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 SLU7O95391 586 aaKnown RBP11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 C6orf47O95873 294 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 ADAP00813 363 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 YES1P07947 543 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 ELK4P28324 431 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 MAPK1P28482 360 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 HPCAL1P37235 193 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 RPL3P39023 403 aaKnown RBP11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 ATP12AP54707 1039 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 TNK1Q13470 666 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 TP53BP2Q13625 1128 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 TAB1Q15750 504 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 NDUFAF6Q330K2 333 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 SPDYE7PQ495Y7 208 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 DCST2Q5T1A1 773 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 NCMAPQ5T1S8 102 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 ADAM5Q6NVV9 412 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 TFAP2EQ6VUC0 442 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 ZNF619Q8N2I2 560 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 EIF1ADQ8N9N8 165 aaKnown RBP11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 OR56A1Q8NGH5 318 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 RFWD2Q8NHY2 731 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 AGR3Q8TD06 166 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 HSD17B8Q92506 261 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 ZNF524Q96C55 264 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 PPP3R2Q96LZ3 170 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 MECRQ9BV79 373 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 ANKZF1Q9H8Y5 726 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 EML4Q9HC35 981 aaKnown RBP11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 NGBQ9NPG2 151 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 GPATCH2Q9NW75 528 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 KLHL13Q9P2N7 655 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 FAF1Q9UNN5 650 aaPredicted RBP11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 DTNAQ9Y4J8 743 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 RNF115Q9Y4L5 304 aa11.9□□□□□ -0.5
POLR2J3-219ENST00000608621 IGHV3-15A0A0B4J1V0 119 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 A0A1W2PNR3 127 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 CLOCKO15516 846 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 SOX30O94993 753 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 CD3EP07766 207 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 DANCRP0C864 163 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 PRKCAP17252 672 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 ENPP1P22413 925 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 IL32P24001 234 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 SUMO3P55854 103 aaPredicted RBP11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 RPS4XP62701 263 aaKnown RBP11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 ITGADQ13349 1161 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 PTGR1Q14914 329 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 LSM12Q3MHD2 195 aaKnown RBP11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 C6orf136Q5SQH8 315 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 IL23RQ5VWK5 629 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 SLC43A2Q8N370 569 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 KRTCAP2Q8N6L1 136 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 ZNF614Q8N883 585 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 BANPQ8N9N5 519 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 PSMA8Q8TAA3 256 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 ZFP90Q8TF47 636 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 NEUROG1Q92886 237 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 COQ8BQ96D53 544 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 C3orf30Q96M34 536 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 C1orf50Q9BV19 199 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 ESRP2Q9H6T0 727 aaKnown RBP11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 COQ10BQ9H8M1 238 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 GP6Q9HCN6 339 aa11.89□□□□□ -0.51
POLR2J3-219ENST00000608621 ATAD3AQ9NVI7 634 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms