RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 BHLHE41Q9C0J9 482 aaPredicted RBP6.8□□□□□ -1.32
CUX1-219ENST00000606749 OR10A4Q9H209 315 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 C12orf49Q9H741 205 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 ZNF395Q9H8N7 513 aaPredicted RBP6.8□□□□□ -1.32
CUX1-219ENST00000606749 FANCFQ9NPI8 374 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 TIGARQ9NQ88 270 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 CARD8Q9Y2G2 431 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 GPR52Q9Y2T5 361 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 DTNAQ9Y4J8 743 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 ACTL7BQ9Y614 415 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 GPC6Q9Y625 555 aaPredicted RBP6.8□□□□□ -1.32
CUX1-219ENST00000606749 HEATR5AQ86XA9 2040 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.79□□□□□ -1.32
CUX1-219ENST00000606749 GJE1A6NN92 205 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 FAM171A2A8MVW0 826 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 ESPNB1AK53 854 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 H3BNH8 94 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 CFLARO15519 480 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 ITM2AO43736 263 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 TYROBPO43914 113 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 SKAP2O75563 359 aaPredicted RBP6.79□□□□□ -1.32
CUX1-219ENST00000606749 GCM2O75603 506 aaPredicted RBP6.79□□□□□ -1.32
CUX1-219ENST00000606749 PRKD3O94806 890 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 NTN1O95631 604 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 LY6G6DO95868 133 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 PLAUP00749 431 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 KRT16P08779 473 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 PABPC4LP0CB38 370 aaKnown RBP6.79□□□□□ -1.32
CUX1-219ENST00000606749 G6PDP11413 515 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 PRKCAP17252 672 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 PSMB1P20618 241 aaKnown RBP6.79□□□□□ -1.32
CUX1-219ENST00000606749 ELK4P28324 431 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 AGTR1P30556 359 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 RNF144AP50876 292 aaPredicted RBP6.79□□□□□ -1.32
CUX1-219ENST00000606749 SUMO3P55854 103 aaPredicted RBP6.79□□□□□ -1.32
CUX1-219ENST00000606749 CLDN8P56748 225 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 C21orf58P58505 322 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 HBA1P69905 142 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 EMX2Q04743 252 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 FOXF1Q12946 379 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 RNPS1Q15287 305 aaKnown RBP6.79□□□□□ -1.32
CUX1-219ENST00000606749 ZNF239Q16600 458 aaKnown RBP6.79□□□□□ -1.32
CUX1-219ENST00000606749 PGS1Q32NB8 556 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 NDUFAF6Q330K2 333 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 SLC25A53Q5H9E4 307 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 TMEM201Q5SNT2 666 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 BHLHB9Q6PI77 547 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 PLEKHM3Q6ZWE6 761 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 NUFIP2Q7Z417 695 aaKnown RBP6.79□□□□□ -1.32
CUX1-219ENST00000606749 YTHDF3Q7Z739 585 aaKnown RBP6.79□□□□□ -1.32
CUX1-219ENST00000606749 TUSC5Q8IXB3 177 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 ATP6V1C2Q8NEY4 427 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 OR5D16Q8NGK9 328 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 OR5W2Q8NH69 310 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 OR5AK3PQ8NH89 298 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 RNF128Q8TEB7 428 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 ABHD3Q8WU67 409 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 IGFBPL1Q8WX77 278 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 CPNE4Q96A23 557 aaPredicted RBP6.79□□□□□ -1.32
CUX1-219ENST00000606749 MOAP1Q96BY2 351 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 TUBGCP3Q96CW5 907 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 ARSGQ96EG1 525 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 PERPQ96FX8 193 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 PLPPR2Q96GM1 343 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 REXO5Q96IC2 774 aaKnown RBP6.79□□□□□ -1.32
CUX1-219ENST00000606749 MRGPRX4Q96LA9 322 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 Q96MF0 132 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 OR7D2Q96RA2 312 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 TMEM204Q9BSN7 226 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 BDH2Q9BUT1 245 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 DUSP26Q9BV47 211 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 GSX2Q9BZM3 304 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 ACTR6Q9GZN1 396 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 DSCAMO60469 2012 aa6.79□□□□□ -1.32
CUX1-219ENST00000606749 SERINC4A6NH21 518 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 DUXAA6NLW8 204 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 H7C1Q1 480 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 HAX1O00165 279 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 ETV2O00321 342 aaPredicted RBP6.78□□□□□ -1.32
CUX1-219ENST00000606749 ZNF264O43296 627 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 EIF4E2O60573 245 aaKnown RBP6.78□□□□□ -1.32
CUX1-219ENST00000606749 FCMRO60667 390 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 DNAJA2O60884 412 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 HEXAP06865 529 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 YES1P07947 543 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 PAX1P15863 534 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 MATN1P21941 496 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 ENPP1P22413 925 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 PTH2RP49190 550 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 NR1H2P55055 460 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 RAC3P60763 192 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 RPS26P62854 115 aaKnown RBP6.78□□□□□ -1.32
CUX1-219ENST00000606749 MAD2L1Q13257 205 aaPredicted RBP6.78□□□□□ -1.32
CUX1-219ENST00000606749 QPRTQ15274 297 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 TSC22D1Q15714 1073 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 ZNF141Q15928 474 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 SMU1Q2TAY7 513 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 PDZK1Q5T2W1 519 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 SFRP5Q5T4F7 317 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 OR4F3Q6IEY1 312 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms