RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 TRIM2Q9C040 744 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 POLR2J2Q9GZM3 115 aaKnown RBP17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 DUSP21Q9H596 190 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 SNX5Q9Y5X3 404 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 EP300Q09472 2414 aaPredicted RBP17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 IFI30P13284 250 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 TBXA2RP21731 343 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 DCAF12Q5T6F0 453 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 KIRREL2Q6UWL6 708 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 RAB11FIP2Q7L804 512 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 BCDIN3DQ7Z5W3 292 aaKnown RBP17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 SLCO6A1Q86UG4 719 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 TCEANCQ8N8B7 351 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 LSMEM1Q8N8F7 131 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 ZNF441Q8N8Z8 693 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 DGCR14Q96DF8 476 aaKnown RBP17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 SEMA4CQ9C0C4 833 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 NDUFA13Q9P0J0 144 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 RPS6KB2Q9UBS0 482 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 SLC35A3Q9Y2D2 325 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 PTRH2Q9Y3E5 179 aaKnown RBP17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 FREM2Q5SZK8 3169 aa17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 TRBV11-1A0A0K0K1C0 115 aa17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 WWP2O00308 870 aa17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 TO15178 435 aa17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 TSPAN2O60636 221 aa17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 ZNF354AO60765 605 aaPredicted RBP17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 RFPL3O75679 317 aa17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 MAKP20794 623 aa17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 XAF1Q6GPH4 301 aa17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 TMEM205Q6UW68 189 aa17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 GPR141Q7Z602 305 aa17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 MARCH3Q86UD3 253 aa17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 TMCO5AQ8N6Q1 288 aa17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 OR8D4Q8NGM9 314 aa17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 HSPBAP1Q96EW2 488 aa17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 SH3YL1Q96HL8 342 aaPredicted RBP17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 YIPF3Q9GZM5 350 aa17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 PISDQ9UG56 409 aa17.61■□□□□ 0.41
TUBB4B-202ENST00000604929 B4E171 279 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 CHP2O43745 196 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 UBL4AP11441 157 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 FPR3P25089 353 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 TSPAN7P41732 249 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 COPZ1P61923 177 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 CDK5Q00535 292 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 RAB39AQ14964 217 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 ZSWIM7Q19AV6 140 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 ISXQ2M1V0 245 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 FNDC7Q5VTL7 733 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 C12orf73Q69YU5 71 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 RASSF6Q6ZTQ3 369 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 SLC34A3Q8N130 599 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 POGLUT1Q8NBL1 392 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 TEX47Q8TBZ9 253 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 KLHDC3Q9BQ90 382 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 STRADBQ9C0K7 418 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 MEPEQ9NQ76 525 aaPredicted RBP17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 CEPT1Q9Y6K0 416 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 COL5A1P20908 1838 aaPredicted RBP17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 ZNF264O43296 627 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 KLF4O43474 513 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 TLX2O43763 284 aaPredicted RBP17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 KLF7O75840 302 aaPredicted RBP17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 STAT5AP42229 794 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 MAP2K4P45985 399 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 MVKQ03426 396 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 EMX1Q04741 257 aaPredicted RBP17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 CNPY1Q3B7I2 92 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 ULK3Q6PHR2 472 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 RNF113BQ8IZP6 322 aaKnown RBP17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 GGHQ92820 318 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 NMD3Q96D46 503 aaKnown RBP17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 BPIFA2Q96DR5 249 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 LRFN5Q96NI6 719 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 RBM38Q9H0Z9 239 aaKnown RBP17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 EVA1AQ9H8M9 152 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 WDR54Q9H977 334 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 KRCC1Q9NPI7 259 aaPredicted RBP17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 GPR83Q9NYM4 423 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 MED31Q9Y3C7 131 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 KNTC1P50748 2209 aa17.6■□□□□ 0.41
TUBB4B-202ENST00000604929 VGLL3A8MV65 326 aa17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 C9J4A7 227 aa17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 PRKYO43930 277 aa17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 MAN1A2O60476 641 aa17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 STK17BO94768 372 aa17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 CH25HO95992 272 aa17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 NGFRP08138 427 aa17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 C21orf33P30042 268 aaPredicted RBP17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 ADH7P40394 386 aa17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 ZBED5Q49AG3 693 aa17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 SLC30A6Q6NXT4 461 aa17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 FAM198BQ6UWH4 519 aa17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 DHRS13Q6UX07 377 aa17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 VMP1Q96GC9 406 aa17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 COPS4Q9BT78 406 aa17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 TSSK6Q9BXA6 273 aa17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 CLN6Q9NWW5 311 aa17.59■□□□□ 0.41
TUBB4B-202ENST00000604929 SELENONQ9NZV5 590 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms