RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 PON3Q15166 354 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 TOMM34Q15785 309 aaPredicted RBP12.98□□□□□ -0.33
TUBE1-208ENST00000604743 ZNF141Q15928 474 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 MAPK14Q16539 360 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 SLC2A7Q6PXP3 512 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 FRRS1Q6ZNA5 592 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 DMRTC2Q8IXT2 367 aaPredicted RBP12.98□□□□□ -0.33
TUBE1-208ENST00000604743 ZNF619Q8N2I2 560 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 ANKFN1Q8N957 763 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 ATP6V1C2Q8NEY4 427 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 FBXO27Q8NI29 283 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 ZFP90Q8TF47 636 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 LRRC46Q96FV0 321 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 UCN2Q96RP3 112 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 CCDC167Q9P0B6 97 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 DCTN4Q9UJW0 460 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 ICAM5Q9UMF0 924 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 NR5A2O00482 541 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 KIAA0513O60268 411 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 EIF4E2O60573 245 aaKnown RBP12.97□□□□□ -0.33
TUBE1-208ENST00000604743 H6PDO95479 791 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 UBTFL6P0CB48 400 aaPredicted RBP12.97□□□□□ -0.33
TUBE1-208ENST00000604743 NR2F1P10589 423 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 IGFBP2P18065 325 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 NCF2P19878 526 aaPredicted RBP12.97□□□□□ -0.33
TUBE1-208ENST00000604743 SFTPDP35247 375 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 CRATP43155 626 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 MYBPHQ13203 477 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 CBFBQ13951 182 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 LUZP2Q86TE4 346 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 GGNQ86UU5 652 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 CNEP1R1Q8N9A8 125 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 TOR1AIP2Q8NFQ8 470 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 OR5W2Q8NH69 310 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 FNDC9Q8TBE3 224 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 GPR119Q8TDV5 335 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 ZG16BQ96DA0 208 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 AURKBQ96GD4 344 aaPredicted RBP12.97□□□□□ -0.33
TUBE1-208ENST00000604743 ZFP3Q96NJ6 502 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 THUMPD3Q9BV44 507 aaKnown RBP12.97□□□□□ -0.33
TUBE1-208ENST00000604743 PRRG4Q9BZD6 226 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 QRSL1Q9H0R6 528 aaKnown RBP12.97□□□□□ -0.33
TUBE1-208ENST00000604743 TPT1P8Q9HAU6 139 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 NPHS2Q9NP85 383 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 L3MBTL1Q9Y468 752 aa12.97□□□□□ -0.33
TUBE1-208ENST00000604743 SYT5O00445 386 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 TNFSF11O14788 317 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 EDF1O60869 148 aaKnown RBP12.96□□□□□ -0.33
TUBE1-208ENST00000604743 IL18BPO95998 194 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 ETFAP13804 333 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 ME2P23368 584 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 PSMA4P25789 261 aaKnown RBP12.96□□□□□ -0.33
TUBE1-208ENST00000604743 EIF1P41567 113 aaKnown RBP12.96□□□□□ -0.33
TUBE1-208ENST00000604743 SUMO3P55854 103 aaPredicted RBP12.96□□□□□ -0.33
TUBE1-208ENST00000604743 RAC1P63000 192 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 SIRPAP78324 504 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 TLE4Q04727 773 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 FGFBP1Q14512 234 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 QPRTQ15274 297 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 AGKQ53H12 422 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 MSANTD1Q6ZTZ1 278 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 EIF3MQ7L2H7 374 aaKnown RBP12.96□□□□□ -0.33
TUBE1-208ENST00000604743 FUNDC1Q8IVP5 155 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 LILRA2Q8N149 483 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 METTL25Q8N6Q8 603 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 ACBD4Q8NC06 268 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 OR10D3Q8NH80 312 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 GTF2H4Q92759 462 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 RNASE6Q93091 150 aaKnown RBP12.96□□□□□ -0.33
TUBE1-208ENST00000604743 ZNF524Q96C55 264 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 SFXN3Q9BWM7 321 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 LAT2Q9GZY6 243 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 SAP130Q9H0E3 1048 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 POLE3Q9NRF9 147 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 LIPT1Q9Y234 373 aa12.96□□□□□ -0.33
TUBE1-208ENST00000604743 LRBAP50851 2863 aa12.96□□□□□ -0.34
TUBE1-208ENST00000604743 UQCRHLA0A096LP55 91 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 A0A0G2JND7 137 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 A0A0J9YW62 118 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 A0A1W2PNV4 684 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 C7orf72A4D263 438 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 CLDN24A6NM45 220 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 EFNA2O43921 213 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 CXCL13O43927 109 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 BCAS1O75363 584 aaPredicted RBP12.95□□□□□ -0.34
TUBE1-208ENST00000604743 SMNDC1O75940 238 aaKnown RBP eCLIP12.95□□□□□ -0.34
TUBE1-208ENST00000604743 CHRM4P08173 479 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 ZCCHC18P0CG32 403 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 PRKCAP17252 672 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 SSTR2P30874 369 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 RYKP34925 604 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 CPA2P48052 419 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 TXNL4AP83876 142 aaKnown RBP12.95□□□□□ -0.34
TUBE1-208ENST00000604743 SF3A3Q12874 501 aaKnown RBP eCLIP12.95□□□□□ -0.34
TUBE1-208ENST00000604743 SKP2Q13309 424 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 SQLEQ14534 574 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 PDSS1Q5T2R2 415 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 HBMQ6B0K9 141 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 OR2A2Q6IF42 318 aa12.95□□□□□ -0.34
TUBE1-208ENST00000604743 SPDL1Q96EA4 605 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms