RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 REXO5Q96IC2 774 aaKnown RBP12.58□□□□□ -0.4
RNF40-212ENST00000602784 ZNF583Q96ND8 569 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 ZNF607Q96SK3 696 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 TIMP4Q99727 224 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 PIGQQ9BRB3 760 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 PCNX3Q9H6A9 2034 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 MED17Q9NVC6 651 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 ARL8BQ9NVJ2 186 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 ACAD8Q9UKU7 415 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 ANGPT4Q9Y264 503 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 SLC6A5Q9Y345 797 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 GPC6Q9Y625 555 aaPredicted RBP12.58□□□□□ -0.4
RNF40-212ENST00000602784 HIVEP3Q5T1R4 2406 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 NPIPA2E9PIF3 369 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 NPIPA3F8WFD2 350 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 PYCARD-AS1I3L0S3 204 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 ETV2O00321 342 aaPredicted RBP12.57□□□□□ -0.4
RNF40-212ENST00000602784 SERPINB7O75635 380 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 LINGO3P0C6S8 592 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 PABPC4LP0CB38 370 aaKnown RBP12.57□□□□□ -0.4
RNF40-212ENST00000602784 UBTFL6P0CB48 400 aaPredicted RBP12.57□□□□□ -0.4
RNF40-212ENST00000602784 CPN1P15169 458 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 BMP7P18075 431 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 ADH6P28332 368 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 SLC6A8P48029 635 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 EEF1A1P68104 462 aaKnown RBP12.57□□□□□ -0.4
RNF40-212ENST00000602784 KCNC4Q03721 635 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 CBFBQ13951 182 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 VEZF1Q14119 521 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 VMACQ2NL98 169 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 PLPPR5Q32ZL2 321 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 GXYLT1Q4G148 440 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 MRPL2Q5T653 305 aaKnown RBP12.57□□□□□ -0.4
RNF40-212ENST00000602784 WLSQ5T9L3 541 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 INTS11Q5TA45 600 aaKnown RBP12.57□□□□□ -0.4
RNF40-212ENST00000602784 ENPP6Q6UWR7 440 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 SLC15A3Q8IY34 581 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 PM20D2Q8IYS1 436 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 EID3Q8N140 333 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 BHLHE22Q8NFJ8 381 aaPredicted RBP12.57□□□□□ -0.4
RNF40-212ENST00000602784 SFXN2Q96NB2 322 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 UGT2B28Q9BY64 529 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 PRDM14Q9GZV8 571 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 ZNF443Q9Y2A4 671 aaPredicted RBP12.57□□□□□ -0.4
RNF40-212ENST00000602784 TENM4Q6N022 2769 aa12.57□□□□□ -0.4
RNF40-212ENST00000602784 OR2M5A3KFT3 312 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 CLEC18AA5D8T8 446 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 PRORSD1PA6NEY8 169 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 CLDN24A6NM45 220 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 FAAHO00519 579 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 WDR1O75083 606 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 NTN1O95631 604 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 NUDT14O95848 222 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 TPOP07202 933 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 PGCP20142 388 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 PSMA4P25789 261 aaKnown RBP12.56□□□□□ -0.4
RNF40-212ENST00000602784 PRKAR1BP31321 381 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 PTGER4P35408 488 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 RNF144AP50876 292 aaPredicted RBP12.56□□□□□ -0.4
RNF40-212ENST00000602784 DLX5P56178 289 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 PLAURQ03405 335 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 SF3B4Q15427 424 aaKnown RBP eCLIP12.56□□□□□ -0.4
RNF40-212ENST00000602784 C3AR1Q16581 482 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 NDUFAF6Q330K2 333 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 C4orf17Q53FE4 359 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 SLC25A53Q5H9E4 307 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 EMC4Q5J8M3 183 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 ZNF311Q5JNZ3 666 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 RAET1LQ5VY80 246 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 DHRS4L2Q6PKH6 230 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 CLEC18BQ6UXF7 455 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 CCDC80Q76M96 950 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 HMGN2P46Q86SG4 172 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 PATL1Q86TB9 770 aaKnown RBP12.56□□□□□ -0.4
RNF40-212ENST00000602784 VRK2Q86Y07 508 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 TMCO5AQ8N6Q1 288 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 CLEC18CQ8NCF0 446 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 TMEM234Q8WY98 164 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 ST8SIA1Q92185 356 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 CNOT9Q92600 299 aaKnown RBP12.56□□□□□ -0.4
RNF40-212ENST00000602784 NSL1Q96IY1 281 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 MRGPRX4Q96LA9 322 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 TP63Q9H3D4 680 aaPredicted RBP12.56□□□□□ -0.4
RNF40-212ENST00000602784 EVA1AQ9H8M9 152 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 CMTM6Q9NX76 183 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 NDE1Q9NXR1 346 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 DNAJB12Q9NXW2 375 aaKnown RBP12.56□□□□□ -0.4
RNF40-212ENST00000602784 STOML1Q9UBI4 398 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 ABCD2Q9UBJ2 740 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 VDAC3Q9Y277 283 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 SLC5A6Q9Y289 635 aa12.56□□□□□ -0.4
RNF40-212ENST00000602784 RPH3AQ9Y2J0 694 aaPredicted RBP12.56□□□□□ -0.4
RNF40-212ENST00000602784 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.55□□□□□ -0.4
RNF40-212ENST00000602784 TRGV8A0A0C4DH27 118 aa12.55□□□□□ -0.4
RNF40-212ENST00000602784 FIGNL2A6NMB9 653 aa12.55□□□□□ -0.4
RNF40-212ENST00000602784 AHRRA9YTQ3 701 aa12.55□□□□□ -0.4
RNF40-212ENST00000602784 FAM220BPB1ANY3 271 aa12.55□□□□□ -0.4
RNF40-212ENST00000602784 E9PLN8 166 aa12.55□□□□□ -0.4
RNF40-212ENST00000602784 ZNHIT1O43257 154 aa12.55□□□□□ -0.4
RNF40-212ENST00000602784 GMFGO60234 142 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms