RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ATP6V1C2Q8NEY4 427 aa11.72□□□□□ -0.53
RPS28-204ENST00000602140 STEAP2Q8NFT2 490 aa11.72□□□□□ -0.53
RPS28-204ENST00000602140 RAB3IL1Q8TBN0 382 aa11.72□□□□□ -0.53
RPS28-204ENST00000602140 ADAMTS15Q8TE58 950 aa11.72□□□□□ -0.53
RPS28-204ENST00000602140 OR5P2Q8WZ92 322 aa11.72□□□□□ -0.53
RPS28-204ENST00000602140 AKAP1Q92667 903 aaKnown RBP eCLIP11.72□□□□□ -0.53
RPS28-204ENST00000602140 S100PBPQ96BU1 408 aa11.72□□□□□ -0.53
RPS28-204ENST00000602140 APOPT1Q96IL0 206 aa11.72□□□□□ -0.53
RPS28-204ENST00000602140 PPP3R2Q96LZ3 170 aa11.72□□□□□ -0.53
RPS28-204ENST00000602140 TACO1Q9BSH4 297 aaKnown RBP11.72□□□□□ -0.53
RPS28-204ENST00000602140 MECRQ9BV79 373 aa11.72□□□□□ -0.53
RPS28-204ENST00000602140 HDHD5Q9BXW7 423 aa11.72□□□□□ -0.53
RPS28-204ENST00000602140 ACTRT3Q9BYD9 372 aa11.72□□□□□ -0.53
RPS28-204ENST00000602140 HOXD1Q9GZZ0 328 aa11.72□□□□□ -0.53
RPS28-204ENST00000602140 CXorf36Q9H7Y0 433 aa11.72□□□□□ -0.53
RPS28-204ENST00000602140 EML4Q9HC35 981 aaKnown RBP11.72□□□□□ -0.53
RPS28-204ENST00000602140 ICAM5Q9UMF0 924 aa11.72□□□□□ -0.53
RPS28-204ENST00000602140 FAF1Q9UNN5 650 aaPredicted RBP11.72□□□□□ -0.53
RPS28-204ENST00000602140 KCNE3Q9Y6H6 103 aa11.72□□□□□ -0.53
RPS28-204ENST00000602140 DNHD1Q96M86 4753 aa11.72□□□□□ -0.53
RPS28-204ENST00000602140 ROS1P08922 2347 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 GJE1A6NN92 205 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 INAFM1C9JVW0 142 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 H3BNH8 94 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 GTPBP1O00178 669 aaKnown RBP11.71□□□□□ -0.53
RPS28-204ENST00000602140 TMCC2O75069 709 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 GCM2O75603 506 aaPredicted RBP11.71□□□□□ -0.53
RPS28-204ENST00000602140 SLU7O95391 586 aaKnown RBP11.71□□□□□ -0.53
RPS28-204ENST00000602140 ATP12AP54707 1039 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 SUMO3P55854 103 aaPredicted RBP11.71□□□□□ -0.53
RPS28-204ENST00000602140 PPP2R2BQ00005 443 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 PTGR1Q14914 329 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 TOMM34Q15785 309 aaPredicted RBP11.71□□□□□ -0.53
RPS28-204ENST00000602140 SPDYE7PQ495Y7 208 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.71□□□□□ -0.53
RPS28-204ENST00000602140 SFRP5Q5T4F7 317 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 TFAP2EQ6VUC0 442 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 ZCCHC23Q6ZST2 131 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 FCRLAQ7L513 359 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 GABRG1Q8N1C3 465 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 ZNF614Q8N883 585 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 OR56A1Q8NGH5 318 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 PSMA8Q8TAA3 256 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 GPR119Q8TDV5 335 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 C3orf30Q96M34 536 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 C1orf50Q9BV19 199 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 GPATCH2Q9NW75 528 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 MKS1Q9NXB0 559 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 KLHL13Q9P2N7 655 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 LAMP3Q9UQV4 416 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 ACTL7BQ9Y614 415 aa11.71□□□□□ -0.53
RPS28-204ENST00000602140 GPC6Q9Y625 555 aaPredicted RBP11.71□□□□□ -0.53
RPS28-204ENST00000602140 IGHV3-15A0A0B4J1V0 119 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 KIAA1324LA8MWY0 1029 aaPredicted RBP11.7□□□□□ -0.54
RPS28-204ENST00000602140 NPIPB9F8W1W9 429 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 CLOCKO15516 846 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 LYPLA1O75608 230 aaPredicted RBP11.7□□□□□ -0.54
RPS28-204ENST00000602140 PRKD3O94806 890 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 C6orf47O95873 294 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 YES1P07947 543 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 KRT16P08779 473 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 PRKCAP17252 672 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 IL32P24001 234 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 CAPRIN1Q14444 709 aaKnown RBP11.7□□□□□ -0.54
RPS28-204ENST00000602140 TAB1Q15750 504 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 LSM12Q3MHD2 195 aaKnown RBP11.7□□□□□ -0.54
RPS28-204ENST00000602140 ATP6AP1LQ52LC2 224 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 XKR7Q5GH72 579 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 IL23RQ5VWK5 629 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 ZNF619Q8N2I2 560 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 KRTCAP2Q8N6L1 136 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 BANPQ8N9N5 519 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 OR5AK3PQ8NH89 298 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 OR2W6PQ8NHA6 318 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 LILRB1Q8NHL6 650 aaPredicted RBP11.7□□□□□ -0.54
RPS28-204ENST00000602140 RFWD2Q8NHY2 731 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 ZFP90Q8TF47 636 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 ZNF524Q96C55 264 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 OR7D2Q96RA2 312 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 COQ10BQ9H8M1 238 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 ANKZF1Q9H8Y5 726 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 GP6Q9HCN6 339 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 ATAD3AQ9NVI7 634 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 SLC17A7Q9P2U7 560 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 DTNAQ9Y4J8 743 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 RNF115Q9Y4L5 304 aa11.7□□□□□ -0.54
RPS28-204ENST00000602140 JMJD1CQ15652 2540 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 A0A1W2PNR3 127 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 CFLARO15519 480 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 SPAG7O75391 227 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 SOX30O94993 753 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 ADAP00813 363 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 CD3EP07766 207 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 ENPP1P22413 925 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 SLC7A1P30825 629 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 ARRB2P32121 409 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 CCR4P51679 360 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 RPS4XP62701 263 aaKnown RBP11.69□□□□□ -0.54
RPS28-204ENST00000602140 TNK1Q13470 666 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 C6orf136Q5SQH8 315 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms