RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 NDUFAF6Q330K2 333 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 MARCH3Q86UD3 253 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 RPS19BP1Q86WX3 136 aaKnown RBP16.5■□□□□ 0.23
VRK3-225ENST00000601912 MISPQ8IVT2 679 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 OR4K5Q8NGD3 323 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 RNF217Q8TC41 542 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 ACOT11Q8WXI4 607 aaPredicted RBP16.5■□□□□ 0.23
VRK3-225ENST00000601912 RIBC2Q9H4K1 309 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 FAM118AQ9NWS6 357 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 SELENONQ9NZV5 590 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 CARD8Q9Y2G2 431 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 MRPS18BQ9Y676 258 aaKnown RBP16.5■□□□□ 0.23
VRK3-225ENST00000601912 WDFY3Q8IZQ1 3526 aa16.49■□□□□ 0.23
VRK3-225ENST00000601912 CEP250Q9BV73 2442 aa16.49■□□□□ 0.23
VRK3-225ENST00000601912 EIF4E2O60573 245 aaKnown RBP16.49■□□□□ 0.23
VRK3-225ENST00000601912 ANGPTL1O95841 491 aa16.49■□□□□ 0.23
VRK3-225ENST00000601912 SERPINA7P05543 415 aa16.49■□□□□ 0.23
VRK3-225ENST00000601912 LIPCP11150 499 aa16.49■□□□□ 0.23
VRK3-225ENST00000601912 SLC6A8P48029 635 aa16.49■□□□□ 0.23
VRK3-225ENST00000601912 RSPO4Q2I0M5 234 aaPredicted RBP16.49■□□□□ 0.23
VRK3-225ENST00000601912 OPN5Q6U736 354 aa16.49■□□□□ 0.23
VRK3-225ENST00000601912 APLFQ8IW19 511 aaPredicted RBP16.49■□□□□ 0.23
VRK3-225ENST00000601912 CHERPQ8IWX8 916 aaKnown RBP16.49■□□□□ 0.23
VRK3-225ENST00000601912 CADM2Q8N3J6 435 aa16.49■□□□□ 0.23
VRK3-225ENST00000601912 HGDQ93099 445 aa16.49■□□□□ 0.23
VRK3-225ENST00000601912 GTPBP3Q969Y2 492 aaKnown RBP16.49■□□□□ 0.23
VRK3-225ENST00000601912 SPACA9Q96E40 222 aaPredicted RBP16.49■□□□□ 0.23
VRK3-225ENST00000601912 MBOAT4Q96T53 435 aa16.49■□□□□ 0.23
VRK3-225ENST00000601912 NIPSNAP1Q9BPW8 284 aa16.49■□□□□ 0.23
VRK3-225ENST00000601912 KRCC1Q9NPI7 259 aaPredicted RBP16.49■□□□□ 0.23
VRK3-225ENST00000601912 IL17BQ9UHF5 180 aa16.49■□□□□ 0.23
VRK3-225ENST00000601912 DMXL1Q9Y485 3027 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 A0A087WUU8 490 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 A0A0B4J2E0 115 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 A0A1B0GWA3 101 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 A0A1B0GX12 115 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 HCRTR2O43614 444 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 SCO2O43819 266 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 ADAM11O75078 769 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 THY1P04216 161 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 ITGAMP11215 1152 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 POU2F1P14859 743 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 CCR4P51679 360 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 NTRK2Q16620 822 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 KRT80Q6KB66 452 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 PGBD2Q6P3X8 592 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 ULK3Q6PHR2 472 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 LYPD8Q6UX82 237 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 NKAIN4Q8IVV8 208 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 DND1Q8IYX4 353 aaKnown RBP16.48■□□□□ 0.23
VRK3-225ENST00000601912 GRHL3Q8TE85 626 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 DNAJA4Q8WW22 397 aaPredicted RBP16.48■□□□□ 0.23
VRK3-225ENST00000601912 NR1H4Q96RI1 486 aaPredicted RBP16.48■□□□□ 0.23
VRK3-225ENST00000601912 NODALQ96S42 347 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 DGCR6LQ9BY27 220 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 CDCP1Q9H5V8 836 aa16.48■□□□□ 0.23
VRK3-225ENST00000601912 LOC100130705A0A1B0GUX0 176 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 TP53I11O14683 189 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 SLC16A6O15403 523 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 CHP2O43745 196 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 SSR4P51571 173 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 NPRL3Q12980 569 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 CHAF1BQ13112 559 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 ATP1A4Q13733 1029 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 RTP5Q14D33 572 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 ALG10BQ5I7T1 473 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 C1orf94Q6P1W5 598 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 CBLN3Q6UW01 205 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 ARMC10Q8N2F6 343 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 PARP8Q8N3A8 854 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 PIGXQ8TBF5 258 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 ADAMTS17Q8TE56 1095 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 ASB15Q8WXK1 588 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 MPP4Q96JB8 637 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 HS6ST2Q96MM7 605 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 UCK2Q9BZX2 261 aa16.47■□□□□ 0.23
VRK3-225ENST00000601912 GNAO1P09471 354 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 MYF6P23409 242 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 SOX3P41225 446 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 TPD52P55327 224 aaPredicted RBP16.46■□□□□ 0.23
VRK3-225ENST00000601912 MLF1P58340 268 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 RPP38P78345 283 aaKnown RBP16.46■□□□□ 0.23
VRK3-225ENST00000601912 ZNF117Q03924 483 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 COX10Q12887 443 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 SWT1Q5T5J6 900 aaKnown RBP16.46■□□□□ 0.23
VRK3-225ENST00000601912 FCRLBQ6BAA4 426 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 WBP2NLQ6ICG8 309 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 MBOAT2Q6ZWT7 520 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 RNF113BQ8IZP6 322 aaKnown RBP16.46■□□□□ 0.23
VRK3-225ENST00000601912 TMEM255BQ8WV15 326 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 ARSGQ96EG1 525 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 SH3YL1Q96HL8 342 aaPredicted RBP16.46■□□□□ 0.23
VRK3-225ENST00000601912 GABARAPL3Q9BY60 117 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 RTN4RQ9BZR6 473 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 WDR70Q9NW82 654 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 OIP5O43482 229 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 GSTM3P21266 225 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 ITPKBP27987 946 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 POLR2IP36954 125 aaKnown RBP16.46■□□□□ 0.23
VRK3-225ENST00000601912 IDH2P48735 452 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 205.9 ms