RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 EP300Q09472 2414 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 KPNA4O00629 521 aaPredicted RBP15.71■□□□□ 0.1
SHKBP1-216ENST00000598201 BCL10O95999 233 aa15.71■□□□□ 0.1
SHKBP1-216ENST00000598201 ATP12AP54707 1039 aa15.71■□□□□ 0.1
SHKBP1-216ENST00000598201 FOXL2P58012 376 aa15.71■□□□□ 0.1
SHKBP1-216ENST00000598201 VBP1P61758 197 aa15.71■□□□□ 0.1
SHKBP1-216ENST00000598201 ARHGAP40Q5TG30 622 aa15.71■□□□□ 0.1
SHKBP1-216ENST00000598201 PRR23CQ6ZRP0 262 aa15.71■□□□□ 0.1
SHKBP1-216ENST00000598201 NDNFQ8TB73 568 aa15.71■□□□□ 0.1
SHKBP1-216ENST00000598201 EFHD2Q96C19 240 aaPredicted RBP15.71■□□□□ 0.1
SHKBP1-216ENST00000598201 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.71■□□□□ 0.1
SHKBP1-216ENST00000598201 RXFP3Q9NSD7 469 aa15.71■□□□□ 0.1
SHKBP1-216ENST00000598201 TBC1D23Q9NUY8 699 aa15.71■□□□□ 0.1
SHKBP1-216ENST00000598201 A0A0B4J2E0 115 aa15.7■□□□□ 0.1
SHKBP1-216ENST00000598201 A0A1B0GWA3 101 aa15.7■□□□□ 0.1
SHKBP1-216ENST00000598201 A0A1B0GX12 115 aa15.7■□□□□ 0.1
SHKBP1-216ENST00000598201 DDAH2O95865 285 aa15.7■□□□□ 0.1
SHKBP1-216ENST00000598201 CH25HO95992 272 aa15.7■□□□□ 0.1
SHKBP1-216ENST00000598201 TBC1D25Q3MII6 688 aa15.7■□□□□ 0.1
SHKBP1-216ENST00000598201 ZNF613Q6PF04 617 aa15.7■□□□□ 0.1
SHKBP1-216ENST00000598201 TBC1D15Q8TC07 691 aa15.7■□□□□ 0.1
SHKBP1-216ENST00000598201 TMEM163Q8TC26 289 aa15.7■□□□□ 0.1
SHKBP1-216ENST00000598201 SLC2A12Q8TD20 617 aa15.7■□□□□ 0.1
SHKBP1-216ENST00000598201 TMEM27Q9HBJ8 222 aa15.7■□□□□ 0.1
SHKBP1-216ENST00000598201 CTSFQ9UBX1 484 aa15.7■□□□□ 0.1
SHKBP1-216ENST00000598201 RPL36Q9Y3U8 105 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-216ENST00000598201 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 TCRBV16S1A1N1A0A5B0 115 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 YKT6O15498 198 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 RFPL3O75679 317 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 IGKV3-11P04433 115 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 RPLP0P05388 317 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 TGFBR1P36897 503 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 FXYD6P3P58550 94 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 NCS1P62166 190 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 SQSTM1Q13501 440 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 EID2Q8N6I1 236 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 AMER2Q8N7J2 671 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 WDR36Q8NI36 951 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 ZNF721Q8TF20 911 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 OSTF1Q92882 214 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 SAMD8Q96LT4 415 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 EDEM2Q9BV94 578 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 NXF5Q9H1B4 397 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 MEPEQ9NQ76 525 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 SLC22A11Q9NSA0 550 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 C14orf105Q9NVL8 296 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 CLEC2DQ9UHP7 191 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 CLCA3PQ9Y6N3 262 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 CDH10Q9Y6N8 788 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 CDX4O14627 284 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 TOX3O15405 576 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 ZGLP1P0C6A0 271 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 IFI30P13284 250 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 PRKCDQ05655 676 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 NSDHLQ15738 373 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 MEDAGQ5VYS4 303 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 COX15Q7KZN9 410 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 RNF113BQ8IZP6 322 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 SLC38A9Q8NBW4 561 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 C9orf43Q8TAL5 461 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 CRELD1Q96HD1 420 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 BCL7BQ9BQE9 202 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 VN1R1Q9GZP7 353 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 ENKD1Q9H0I2 346 aa15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 SIDT1Q9NXL6 827 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-216ENST00000598201 UNC119BA6NIH7 251 aa15.68■□□□□ 0.1
SHKBP1-216ENST00000598201 CNOT3O75175 753 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-216ENST00000598201 TIAF1O95411 115 aa15.68■□□□□ 0.1
SHKBP1-216ENST00000598201 CKMT1AP12532 417 aa15.68■□□□□ 0.1
SHKBP1-216ENST00000598201 GRK5P34947 590 aa15.68■□□□□ 0.1
SHKBP1-216ENST00000598201 ELAVL1Q15717 326 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-216ENST00000598201 ARMCX4Q5H9R4 360 aa15.68■□□□□ 0.1
SHKBP1-216ENST00000598201 SHISA6Q6ZSJ9 500 aa15.68■□□□□ 0.1
SHKBP1-216ENST00000598201 SLC46A3Q7Z3Q1 461 aa15.68■□□□□ 0.1
SHKBP1-216ENST00000598201 FAM181AQ8N9Y4 354 aa15.68■□□□□ 0.1
SHKBP1-216ENST00000598201 TMEM80Q96HE8 168 aa15.68■□□□□ 0.1
SHKBP1-216ENST00000598201 SLC46A1Q96NT5 459 aa15.68■□□□□ 0.1
SHKBP1-216ENST00000598201 NUDT9Q9BW91 350 aa15.68■□□□□ 0.1
SHKBP1-216ENST00000598201 KRCC1Q9NPI7 259 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-216ENST00000598201 MKL2Q9ULH7 1088 aa15.68■□□□□ 0.1
SHKBP1-216ENST00000598201 RIF1Q5UIP0 2472 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-216ENST00000598201 IGHV5-10-1A0A0J9YXX1 117 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 SERINC4A6NH21 518 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 SLC22A1O15245 554 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 SURF4O15260 269 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 CHP2O43745 196 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 GFRA3O60609 400 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 SLC2A10O95528 541 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 NGFRP08138 427 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 HSMCR30P0CW71 290 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 RORAP35398 523 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 PPICP45877 212 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 GAS1P54826 345 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 PSMD4P55036 377 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 NCF4Q15080 339 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 MED22Q15528 200 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 PGGHGQ32M88 737 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 YOD1Q5VVQ6 348 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms