RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 MARK4Q96L34 752 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 HS3ST6Q96QI5 342 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 OR52B2Q96RD2 323 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 SMR3AQ99954 134 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 SLC39A3Q9BRY0 314 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 MED18Q9BUE0 208 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 MED4Q9NPJ6 270 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 ZNF226Q9NYT6 803 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 CLEC4AQ9UMR7 237 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 PROCRQ9UNN8 238 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 GPR45Q9Y5Y3 372 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 C16orf97H3BN30 126 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 FCGR2AP12318 317 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 FGFBP1Q14512 234 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 CD226Q15762 336 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 GSTA3Q16772 222 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 PLPPR5Q32ZL2 321 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 ANXA8L1Q5VT79 327 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 ANKRD34AQ69YU3 496 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 OR4F3Q6IEY1 312 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 ZCCHC12Q6PEW1 402 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 ARFGAP2Q8N6H7 521 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 COX18Q8N8Q8 333 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 OR10D3Q8NH80 312 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 POC1BQ8TC44 478 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 SFXN5Q8TD22 340 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 JADE3Q92613 823 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 MOAP1Q96BY2 351 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 RNF145Q96MT1 663 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 TMEM185BQ9H7F4 350 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 CXorf36Q9H7Y0 433 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 ZCCHC3Q9NUD5 404 aaKnown RBP13.58□□□□□ -0.24
TGFB1-202ENST00000597453 MED17Q9NVC6 651 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 SNX8Q9Y5X2 465 aa13.58□□□□□ -0.24
TGFB1-202ENST00000597453 A0A087WZY1 265 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 C7orf72A4D263 438 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 UBDO15205 165 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 CXCL13O43927 109 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 SCN2BO60939 215 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 HMGN2P05204 90 aaKnown RBP13.57□□□□□ -0.24
TGFB1-202ENST00000597453 ALOX5P09917 674 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 IL11P20809 199 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 LOXP28300 417 aaPredicted RBP13.57□□□□□ -0.24
TGFB1-202ENST00000597453 PRIM2P49643 509 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 RNF144AP50876 292 aaPredicted RBP13.57□□□□□ -0.24
TGFB1-202ENST00000597453 UFM1P61960 85 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 HBA1P69905 142 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 NKX6-1P78426 367 aaPredicted RBP13.57□□□□□ -0.24
TGFB1-202ENST00000597453 LASP1Q14847 261 aaKnown RBP13.57□□□□□ -0.24
TGFB1-202ENST00000597453 EXOC3L2Q2M3D2 409 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 PDCD4Q53EL6 469 aaKnown RBP13.57□□□□□ -0.24
TGFB1-202ENST00000597453 SPANXN4Q5MJ08 99 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 CLECL1Q8IZS7 167 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 GLB1L3Q8NCI6 653 aaPredicted RBP13.57□□□□□ -0.24
TGFB1-202ENST00000597453 VPS37AQ8NEZ2 397 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 OR56A1Q8NGH5 318 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 CDS1Q92903 461 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 ZBTB8AQ96BR9 441 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 TEX37Q96LM6 180 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 PRRG4Q9BZD6 226 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 KLHL4Q9C0H6 718 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 SDR39U1Q9NRG7 319 aaPredicted RBP13.57□□□□□ -0.24
TGFB1-202ENST00000597453 UBQLN4Q9NRR5 601 aa13.57□□□□□ -0.24
TGFB1-202ENST00000597453 FREM1Q5H8C1 2179 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 TLN2Q9Y4G6 2542 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 A0A0J9YW62 118 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 PRSS51A0A1B0GVH4 220 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 SCDO00767 359 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 TNFSF11O14788 317 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 ADAMDEC1O15204 470 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 POLR3GO15318 223 aaPredicted RBP13.56□□□□□ -0.24
TGFB1-202ENST00000597453 CFLARO15519 480 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 EDF1O60869 148 aaKnown RBP13.56□□□□□ -0.24
TGFB1-202ENST00000597453 SS18L1O75177 396 aaPredicted RBP13.56□□□□□ -0.24
TGFB1-202ENST00000597453 THBDP07204 575 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 S100A3P33764 101 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 CCT3P49368 545 aaKnown RBP13.56□□□□□ -0.24
TGFB1-202ENST00000597453 IDH3AP50213 366 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 ZNF41P51814 821 aaPredicted RBP13.56□□□□□ -0.24
TGFB1-202ENST00000597453 AQP5P55064 265 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 NME5P56597 212 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 RAC1P63000 192 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 PHC1P78364 1004 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 FAM174BQ3ZCQ3 159 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 SPDYE7PQ495Y7 208 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 BHLHB9Q6PI77 547 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 Q71RC1 249 aaPredicted RBP13.56□□□□□ -0.24
TGFB1-202ENST00000597453 OR6K3Q8NGY3 331 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 OR2V1Q8NHB1 315 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 STON2Q8WXE9 905 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 GMPPAQ96IJ6 420 aaPredicted RBP13.56□□□□□ -0.24
TGFB1-202ENST00000597453 C18orf12Q96KH6 178 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 ZBTB18Q99592 522 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 CCDC28BQ9BUN5 200 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 BTBD2Q9BX70 525 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 UBTD1Q9HAC8 227 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 TCF7L2Q9NQB0 619 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 PLSCR4Q9NRQ2 329 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 GIN1Q9NXP7 522 aa13.56□□□□□ -0.24
TGFB1-202ENST00000597453 PRDM4Q9UKN5 801 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms