RNA–Protein interactions for RNA: ENST00000596161.5

CCDC61-205, Transcript of coiled-coil domain containing 61, humanhuman

TSL 4

Gene CCDC61, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-205ENST00000596161 SLC6A8P48029 635 aa18.16■□□□□ 0.5
CCDC61-205ENST00000596161 GFRA1P56159 465 aa18.16■□□□□ 0.5
CCDC61-205ENST00000596161 GXYLT1Q4G148 440 aa18.16■□□□□ 0.5
CCDC61-205ENST00000596161 INTS11Q5TA45 600 aaKnown RBP18.16■□□□□ 0.5
CCDC61-205ENST00000596161 ERICH5Q6P6B1 374 aa18.16■□□□□ 0.5
CCDC61-205ENST00000596161 ARSKQ6UWY0 536 aa18.16■□□□□ 0.5
CCDC61-205ENST00000596161 DOLPP1Q86YN1 238 aa18.16■□□□□ 0.5
CCDC61-205ENST00000596161 ZZZ3Q8IYH5 903 aa18.16■□□□□ 0.5
CCDC61-205ENST00000596161 ZNF440Q8IYI8 595 aa18.16■□□□□ 0.5
CCDC61-205ENST00000596161 RELTQ969Z4 430 aa18.16■□□□□ 0.5
CCDC61-205ENST00000596161 TIMP4Q99727 224 aa18.16■□□□□ 0.5
CCDC61-205ENST00000596161 STOML1Q9UBI4 398 aa18.16■□□□□ 0.5
CCDC61-205ENST00000596161 SH3BGRL2Q9UJC5 107 aa18.16■□□□□ 0.5
CCDC61-205ENST00000596161 TINAGQ9UJW2 476 aa18.16■□□□□ 0.5
CCDC61-205ENST00000596161 SLC5A6Q9Y289 635 aa18.16■□□□□ 0.5
CCDC61-205ENST00000596161 ZNF443Q9Y2A4 671 aaPredicted RBP18.16■□□□□ 0.5
CCDC61-205ENST00000596161 ZNF407Q9C0G0 2248 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 POLEQ07864 2286 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 OR2M5A3KFT3 312 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 PRORSD1PA6NEY8 169 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 WDR1O75083 606 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 PABPC4LP0CB38 370 aaKnown RBP18.15■□□□□ 0.5
CCDC61-205ENST00000596161 GABRA1P14867 456 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 PCGF2P35227 344 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 EIF1P41567 113 aaKnown RBP18.15■□□□□ 0.5
CCDC61-205ENST00000596161 PER3P56645 1201 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 B3GALT5-AS1P59052 145 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 KRT72Q14CN4 511 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 SF3B4Q15427 424 aaKnown RBP eCLIP18.15■□□□□ 0.5
CCDC61-205ENST00000596161 VMACQ2NL98 169 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 PLPPR5Q32ZL2 321 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 ZNF311Q5JNZ3 666 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 MRPL2Q5T653 305 aaKnown RBP18.15■□□□□ 0.5
CCDC61-205ENST00000596161 RNF220Q5VTB9 566 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 MTFR2Q6P444 385 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 CALHM3Q86XJ0 350 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 VRK2Q86Y07 508 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 GTPBP8Q8N3Z3 284 aaPredicted RBP18.15■□□□□ 0.5
CCDC61-205ENST00000596161 OR5M9Q8NGP3 310 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 GPR119Q8TDV5 335 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 CNOT9Q92600 299 aaKnown RBP18.15■□□□□ 0.5
CCDC61-205ENST00000596161 GPATCH1Q9BRR8 931 aaKnown RBP18.15■□□□□ 0.5
CCDC61-205ENST00000596161 PNPLA3Q9NST1 481 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 TNFRSF10DQ9UBN6 386 aa18.15■□□□□ 0.5
CCDC61-205ENST00000596161 GPC6Q9Y625 555 aaPredicted RBP18.15■□□□□ 0.5
CCDC61-205ENST00000596161 CLDN24A6NM45 220 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 CCL21O00585 134 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 LRRTM2O43300 516 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 SERPINB7O75635 380 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 HOXD4P09016 255 aaPredicted RBP18.14■□□□□ 0.49
CCDC61-205ENST00000596161 LINGO3P0C6S8 592 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 ESRRAP11474 423 aaPredicted RBP18.14■□□□□ 0.49
CCDC61-205ENST00000596161 PEPDP12955 493 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 UQCRBP14927 111 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 PTGER4P35408 488 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 GZMMP51124 257 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 MNAT1P51948 309 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 BCL2A1Q16548 175 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 TMEM44Q2T9K0 475 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 ZNF585AQ6P3V2 769 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 ZNF836Q6ZNA1 936 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 TMEM234Q8WY98 164 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 REXO5Q96IC2 774 aaKnown RBP18.14■□□□□ 0.49
CCDC61-205ENST00000596161 PRDM14Q9GZV8 571 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 PIF1Q9H611 641 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 ARL8BQ9NVJ2 186 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 DNAJB12Q9NXW2 375 aaKnown RBP18.14■□□□□ 0.49
CCDC61-205ENST00000596161 PRDM4Q9UKN5 801 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 CAMK2AQ9UQM7 478 aa18.14■□□□□ 0.49
CCDC61-205ENST00000596161 DNAJC13O75165 2243 aa18.13■□□□□ 0.49
CCDC61-205ENST00000596161 CDHR4A6H8M9 788 aa18.13■□□□□ 0.49
CCDC61-205ENST00000596161 FAM220BPB1ANY3 271 aa18.13■□□□□ 0.49
CCDC61-205ENST00000596161 E9PLN8 166 aa18.13■□□□□ 0.49
CCDC61-205ENST00000596161 DNAJA2O60884 412 aa18.13■□□□□ 0.49
CCDC61-205ENST00000596161 CPN1P15169 458 aa18.13■□□□□ 0.49
CCDC61-205ENST00000596161 POU3F2P20265 443 aaPredicted RBP18.13■□□□□ 0.49
CCDC61-205ENST00000596161 ADH6P28332 368 aa18.13■□□□□ 0.49
CCDC61-205ENST00000596161 PRKAR1BP31321 381 aa18.13■□□□□ 0.49
CCDC61-205ENST00000596161 EEF1A1P68104 462 aaKnown RBP18.13■□□□□ 0.49
CCDC61-205ENST00000596161 QPRTQ15274 297 aa18.13■□□□□ 0.49
CCDC61-205ENST00000596161 EMC4Q5J8M3 183 aa18.13■□□□□ 0.49
CCDC61-205ENST00000596161 C8orf82Q6P1X6 216 aaPredicted RBP18.13■□□□□ 0.49
CCDC61-205ENST00000596161 PATL1Q86TB9 770 aaKnown RBP18.13■□□□□ 0.49
CCDC61-205ENST00000596161 FJX1Q86VR8 437 aa18.13■□□□□ 0.49
CCDC61-205ENST00000596161 GRAMD2AQ8IUY3 354 aa18.13■□□□□ 0.49
CCDC61-205ENST00000596161 FITM2Q8N6M3 262 aa18.13■□□□□ 0.49
CCDC61-205ENST00000596161 BHLHE22Q8NFJ8 381 aaPredicted RBP18.13■□□□□ 0.49
CCDC61-205ENST00000596161 ST8SIA1Q92185 356 aa18.13■□□□□ 0.49
CCDC61-205ENST00000596161 WDYHV1Q96HA8 205 aa18.13■□□□□ 0.49
CCDC61-205ENST00000596161 VKORC1Q9BQB6 163 aa18.13■□□□□ 0.49
CCDC61-205ENST00000596161 AHRRA9YTQ3 701 aa18.12■□□□□ 0.49
CCDC61-205ENST00000596161 AGFG2O95081 481 aa18.12■□□□□ 0.49
CCDC61-205ENST00000596161 FREM3P0C091 2139 aa18.12■□□□□ 0.49
CCDC61-205ENST00000596161 ACVR2AP27037 513 aa18.12■□□□□ 0.49
CCDC61-205ENST00000596161 ELK4P28324 431 aa18.12■□□□□ 0.49
CCDC61-205ENST00000596161 AQP1P29972 269 aa18.12■□□□□ 0.49
CCDC61-205ENST00000596161 CPA2P48052 419 aa18.12■□□□□ 0.49
CCDC61-205ENST00000596161 LHX2P50458 406 aa18.12■□□□□ 0.49
CCDC61-205ENST00000596161 SLC7A2P52569 658 aa18.12■□□□□ 0.49
CCDC61-205ENST00000596161 PCBP3P57721 371 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms