RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 H0Y3Z8 333 aa17.53■□□□□ 0.4
PNKP-207ENST00000596014 ETS2P15036 469 aa17.53■□□□□ 0.4
PNKP-207ENST00000596014 GANABQ14697 944 aaKnown RBP17.53■□□□□ 0.4
PNKP-207ENST00000596014 VRK2Q86Y07 508 aa17.53■□□□□ 0.4
PNKP-207ENST00000596014 HIPK4Q8NE63 616 aa17.53■□□□□ 0.4
PNKP-207ENST00000596014 STMN2Q93045 179 aa17.53■□□□□ 0.4
PNKP-207ENST00000596014 KLHDC3Q9BQ90 382 aa17.53■□□□□ 0.4
PNKP-207ENST00000596014 J3QKU1 62 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 AQP7O14520 342 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 BCAS1O75363 584 aaPredicted RBP17.52■□□□□ 0.4
PNKP-207ENST00000596014 KRT36O76013 467 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 UBTFL6P0CB48 400 aaPredicted RBP17.52■□□□□ 0.4
PNKP-207ENST00000596014 NID1P14543 1247 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 PTGS2P35354 604 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 P2RX1P51575 399 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 PSME3P61289 254 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 RBPJQ06330 500 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 SKP2Q13309 424 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 VMACQ2NL98 169 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 C1orf146Q5VVC0 180 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 ARSKQ6UWY0 536 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 CMIPQ8IY22 773 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 FAM71CQ8NEG0 241 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 LAT2Q9GZY6 243 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 DCLRE1BQ9H816 532 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 NDE1Q9NXR1 346 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 SPRR3Q9UBC9 169 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 PRPF19Q9UMS4 504 aaKnown RBP17.52■□□□□ 0.4
PNKP-207ENST00000596014 ZNF232Q9UNY5 417 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 ANGPT4Q9Y264 503 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 SLC6A5Q9Y345 797 aa17.52■□□□□ 0.4
PNKP-207ENST00000596014 CYP7B1O75881 506 aa17.52■□□□□ 0.39
PNKP-207ENST00000596014 PDE5AO76074 875 aa17.52■□□□□ 0.39
PNKP-207ENST00000596014 THBS1P07996 1170 aa17.52■□□□□ 0.39
PNKP-207ENST00000596014 HK1P19367 917 aa17.52■□□□□ 0.39
PNKP-207ENST00000596014 TCEA1P23193 301 aaKnown RBP17.52■□□□□ 0.39
PNKP-207ENST00000596014 AQP1P29972 269 aa17.52■□□□□ 0.39
PNKP-207ENST00000596014 SLC7A2P52569 658 aa17.52■□□□□ 0.39
PNKP-207ENST00000596014 PLAURQ03405 335 aa17.52■□□□□ 0.39
PNKP-207ENST00000596014 LARS2Q15031 903 aaKnown RBP17.52■□□□□ 0.39
PNKP-207ENST00000596014 RCN1Q15293 331 aa17.52■□□□□ 0.39
PNKP-207ENST00000596014 EIF2S3LQ2VIR3 472 aaKnown RBP17.52■□□□□ 0.39
PNKP-207ENST00000596014 PGM2L1Q6PCE3 622 aa17.52■□□□□ 0.39
PNKP-207ENST00000596014 IFNEQ86WN2 208 aa17.52■□□□□ 0.39
PNKP-207ENST00000596014 CNOT9Q92600 299 aaKnown RBP17.52■□□□□ 0.39
PNKP-207ENST00000596014 REXO5Q96IC2 774 aaKnown RBP17.52■□□□□ 0.39
PNKP-207ENST00000596014 TNFRSF10DQ9UBN6 386 aa17.52■□□□□ 0.39
PNKP-207ENST00000596014 VDAC3Q9Y277 283 aa17.52■□□□□ 0.39
PNKP-207ENST00000596014 RPH3AQ9Y2J0 694 aaPredicted RBP17.52■□□□□ 0.39
PNKP-207ENST00000596014 ZNF835Q9Y2P0 537 aa17.52■□□□□ 0.39
PNKP-207ENST00000596014 AP3M1Q9Y2T2 418 aa17.52■□□□□ 0.39
PNKP-207ENST00000596014 IFT52Q9Y366 437 aa17.52■□□□□ 0.39
PNKP-207ENST00000596014 GPC6Q9Y625 555 aaPredicted RBP17.52■□□□□ 0.39
PNKP-207ENST00000596014 GCN1Q92616 2671 aaKnown RBP17.51■□□□□ 0.39
PNKP-207ENST00000596014 OR14I1A6ND48 311 aa17.51■□□□□ 0.39
PNKP-207ENST00000596014 NPIPA2E9PIF3 369 aa17.51■□□□□ 0.39
PNKP-207ENST00000596014 NPIPA3F8WFD2 350 aa17.51■□□□□ 0.39
PNKP-207ENST00000596014 SLC19A2O60779 497 aa17.51■□□□□ 0.39
PNKP-207ENST00000596014 PABPC4LP0CB38 370 aaKnown RBP17.51■□□□□ 0.39
PNKP-207ENST00000596014 SUMO3P55854 103 aaPredicted RBP17.51■□□□□ 0.39
PNKP-207ENST00000596014 PCBP3P57721 371 aaKnown RBP17.51■□□□□ 0.39
PNKP-207ENST00000596014 ACTR3P61158 418 aa17.51■□□□□ 0.39
PNKP-207ENST00000596014 LIN52Q52LA3 116 aa17.51■□□□□ 0.39
PNKP-207ENST00000596014 ZNF311Q5JNZ3 666 aa17.51■□□□□ 0.39
PNKP-207ENST00000596014 MRPL2Q5T653 305 aaKnown RBP17.51■□□□□ 0.39
PNKP-207ENST00000596014 KRT73Q86Y46 540 aa17.51■□□□□ 0.39
PNKP-207ENST00000596014 SLC30A8Q8IWU4 369 aa17.51■□□□□ 0.39
PNKP-207ENST00000596014 TMCO5AQ8N6Q1 288 aa17.51■□□□□ 0.39
PNKP-207ENST00000596014 OR5W2Q8NH69 310 aa17.51■□□□□ 0.39
PNKP-207ENST00000596014 GPR119Q8TDV5 335 aa17.51■□□□□ 0.39
PNKP-207ENST00000596014 CACYBPQ9HB71 228 aaKnown RBP17.51■□□□□ 0.39
PNKP-207ENST00000596014 MED17Q9NVC6 651 aa17.51■□□□□ 0.39
PNKP-207ENST00000596014 RLIMQ9NVW2 624 aa17.51■□□□□ 0.39
PNKP-207ENST00000596014 USP22Q9UPT9 525 aa17.51■□□□□ 0.39
PNKP-207ENST00000596014 OSGIN2Q9Y236 505 aa17.51■□□□□ 0.39
PNKP-207ENST00000596014 ZNF443Q9Y2A4 671 aaPredicted RBP17.51■□□□□ 0.39
PNKP-207ENST00000596014 A0A087WZY1 265 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 CDHR4A6H8M9 788 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 NME4O00746 187 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 GCM2O75603 506 aaPredicted RBP17.5■□□□□ 0.39
PNKP-207ENST00000596014 NUDT14O95848 222 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 ABOP16442 354 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 PCGF2P35227 344 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 ZNF41P51814 821 aaPredicted RBP17.5■□□□□ 0.39
PNKP-207ENST00000596014 GFRA1P56159 465 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 B3GALT5-AS1P59052 145 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 EEF1A1P68104 462 aaKnown RBP17.5■□□□□ 0.39
PNKP-207ENST00000596014 GLYR1Q49A26 553 aaPredicted RBP17.5■□□□□ 0.39
PNKP-207ENST00000596014 NHSL2Q5HYW2 709 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 RNF220Q5VTB9 566 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 VASNQ6EMK4 673 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 ZNF836Q6ZNA1 936 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 PGAM4Q8N0Y7 254 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 TOR1AIP2Q8NFQ8 470 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 PRR7Q8TB68 274 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 SARAFQ96BY9 339 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 ARSGQ96EG1 525 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 ZNF607Q96SK3 696 aa17.5■□□□□ 0.39
PNKP-207ENST00000596014 RSPO3Q9BXY4 272 aaPredicted RBP17.5■□□□□ 0.39
PNKP-207ENST00000596014 EXOSC3Q9NQT5 275 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms