RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 POLE3Q9NRF9 147 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 WDR45Q9Y484 360 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 PRR14LQ5THK1 2151 aa9.9□□□□□ -0.83
SHKBP1-206ENST00000595523 UQCRHLA0A096LP55 91 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 LINC01387J3KSC0 135 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 ZNF264O43296 627 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 RCBTB2O95199 551 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 H6PDO95479 791 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 NTN1O95631 604 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 UBL4AP11441 157 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 COX6B1P14854 86 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 CAPN3P20807 821 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 BMP5P22003 454 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 SHC1P29353 583 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 ATP4BP51164 291 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 ZNF41P51814 821 aaPredicted RBP9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 AGFG1P52594 562 aaKnown RBP9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 SUMO3P55854 103 aaPredicted RBP9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 DLX5P56178 289 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 STX1BP61266 288 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 CHRNEQ04844 493 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 SKP2Q13309 424 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 FGFBP1Q14512 234 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 ATAD3BQ5T9A4 648 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 CGB2Q6NT52 195 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 MCEMP1Q8IX19 187 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 MSRB3Q8IXL7 192 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 GCNT2Q8N0V5 402 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 ZNF619Q8N2I2 560 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 FAM71CQ8NEG0 241 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 SMPDL3BQ92485 455 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 FIG4Q92562 907 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 WNT2BQ93097 391 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 ITCHQ96J02 903 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 ADGRG7Q96K78 797 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 SPOCK3Q9BQ16 436 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 ACBD3Q9H3P7 528 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 TPT1P8Q9HAU6 139 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 NPHS2Q9NP85 383 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 SLC25A37Q9NYZ2 338 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 CCDC167Q9P0B6 97 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 SLAMF8Q9P0V8 285 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 ZNF629Q9UEG4 869 aaPredicted RBP9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 DCTN4Q9UJW0 460 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 PCDHB14Q9Y5E9 798 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 AP4B1Q9Y6B7 739 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 CELSR1Q9NYQ6 3014 aa9.89□□□□□ -0.83
SHKBP1-206ENST00000595523 AKAP9Q99996 3911 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 DSPPQ9NZW4 1301 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 TRBV5-3A0A0A0MS03 114 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 CLDN24A6NM45 220 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 H3BNH8 94 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 GTPBP1O00178 669 aaKnown RBP9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 ETV2O00321 342 aaPredicted RBP9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 NR5A2O00482 541 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 DVL2O14641 736 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 EIF4E2O60573 245 aaKnown RBP9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 ADAM11O75078 769 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 TNFSF13O75888 250 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 KRT75O95678 551 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 OPN1LWP04000 364 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 TMIGD3P0DMS9 266 aaPredicted RBP9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 ETFAP13804 333 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 PRKCAP17252 672 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 RPS4Y1P22090 263 aaKnown RBP9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 CTSSP25774 331 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 PGM1P36871 562 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 TXNL4AP83876 142 aaKnown RBP9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 SQLEQ14534 574 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 FBXL19-AS1Q494R0 122 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 GPAT3Q53EU6 434 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 PAGE3Q5JUK9 113 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 C6orf10Q5SRN2 563 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 LRIF1Q5T3J3 769 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 MEX3BQ6ZN04 569 aaKnown RBP9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 LSRQ86X29 649 aaPredicted RBP9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 GRAMD2AQ8IUY3 354 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 C10orf111Q8N326 155 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 MEIOBQ8N635 442 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 METTL25Q8N6Q8 603 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 OR5W2Q8NH69 310 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 FBXO27Q8NI29 283 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 INTS12Q96CB8 462 aaKnown RBP9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 SPDL1Q96EA4 605 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 TRNT1Q96Q11 434 aaKnown RBP9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 TM9SF2Q99805 663 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 PINK1Q9BXM7 581 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 LAT2Q9GZY6 243 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 TMEM185BQ9H7F4 350 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 RMND5AQ9H871 391 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 JKAMPQ9P055 326 aa9.88□□□□□ -0.83
SHKBP1-206ENST00000595523 A0A096LPI6 279 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 A0A0J9YW62 118 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 AGAP5A6NIR3 686 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 SLC22A20A6NK97 555 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 EIF1AYO14602 144 aaKnown RBP9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 ADAMDEC1O15204 470 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 AQP8O94778 261 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 ANP32DO95626 131 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms