RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 NCF2P19878 526 aaPredicted RBP11.24□□□□□ -0.61
UPF1-203ENST00000594504 MATN1P21941 496 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 CHI3L1P36222 383 aaPredicted RBP11.24□□□□□ -0.61
UPF1-203ENST00000594504 CDKN2CP42773 168 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 KIR2DL2P43627 348 aaPredicted RBP11.24□□□□□ -0.61
UPF1-203ENST00000594504 DSCR4P56555 118 aaPredicted RBP11.24□□□□□ -0.61
UPF1-203ENST00000594504 RPS26P62854 115 aaKnown RBP11.24□□□□□ -0.61
UPF1-203ENST00000594504 LTBQ06643 244 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 FIGNL1Q6PIW4 674 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 BLOC1S3Q6QNY0 202 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 ZNF621Q6ZSS3 439 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 C22orf34Q6ZV56 151 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 MARCH3Q86UD3 253 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 CXorf67Q86X51 503 aaPredicted RBP11.24□□□□□ -0.61
UPF1-203ENST00000594504 CLEC4FQ8N1N0 589 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 FADS6Q8N9I5 356 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 ZNF610Q8N9Z0 462 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 DUSP19Q8WTR2 217 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 CDS1Q92903 461 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 VPS33AQ96AX1 596 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 PIK3IP1Q96FE7 263 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 ZNF845Q96IR2 970 aaPredicted RBP11.24□□□□□ -0.61
UPF1-203ENST00000594504 ITCHQ96J02 903 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 C18orf12Q96KH6 178 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 ZNF317Q96PQ6 595 aaPredicted RBP11.24□□□□□ -0.61
UPF1-203ENST00000594504 OR7D2Q96RA2 312 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 SLC35A5Q9BS91 424 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 INPP5KQ9BT40 448 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 TMEM120AQ9BXJ8 343 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 PINK1Q9BXM7 581 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 CCDC167Q9P0B6 97 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 TESMINQ9Y4I5 508 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 ZFHX3Q15911 3703 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 SLC22A20A6NK97 555 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 DEFB108AA8MXU0 73 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 H3BML4 177 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 MSTNO14793 375 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 AGR2O95994 175 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 AK1P00568 194 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 NGFRP08138 427 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 INHBBP09529 407 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 ZCCHC18P0CG32 403 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 ATP6V1C1P21283 382 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 CLK3P49761 638 aaKnown RBP11.23□□□□□ -0.61
UPF1-203ENST00000594504 KHKP50053 298 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 ARFIP2P53365 341 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 CLDN20P56880 219 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 TXNL4AP83876 142 aaKnown RBP11.23□□□□□ -0.61
UPF1-203ENST00000594504 BCL2A1Q16548 175 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 AGKQ53H12 422 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 DCST2Q5T1A1 773 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 CCNJQ5T5M9 372 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 RAET1LQ5VY80 246 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 ANKRD34AQ69YU3 496 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 CGB2Q6NT52 195 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 ZNF550Q7Z398 422 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 FUNDC1Q8IVP5 155 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 CIARTQ8N365 385 aaPredicted RBP11.23□□□□□ -0.61
UPF1-203ENST00000594504 OR5D16Q8NGK9 328 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 SMPDL3BQ92485 455 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 DTNBP1Q96EV8 351 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 ZC3HAV1LQ96H79 300 aaKnown RBP11.23□□□□□ -0.61
UPF1-203ENST00000594504 PIGQQ9BRB3 760 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 TBL1XR1Q9BZK7 514 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 OR51I1Q9H343 314 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 SERHL2Q9H4I8 314 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 ZNF385DQ9H6B1 395 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 HHATLQ9HCP6 504 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 SDHAF3Q9NRP4 125 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 MRGBPQ9NV56 204 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 BEX4Q9NWD9 120 aaPredicted RBP11.23□□□□□ -0.61
UPF1-203ENST00000594504 KCNE3Q9Y6H6 103 aa11.23□□□□□ -0.61
UPF1-203ENST00000594504 OR2M5A3KFT3 312 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 NR5A2O00482 541 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 GOSR1O95249 250 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 ANP32DO95626 131 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 KRT75O95678 551 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 CGAP01215 116 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 GSNP06396 782 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 POU2F1P14859 743 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 TBXA2RP21731 343 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 ADSLP30566 484 aaPredicted RBP11.22□□□□□ -0.61
UPF1-203ENST00000594504 CD79BP40259 229 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 MAGEA8P43361 318 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 ANXA11P50995 505 aaKnown RBP11.22□□□□□ -0.61
UPF1-203ENST00000594504 EEF1A1P68104 462 aaKnown RBP11.22□□□□□ -0.61
UPF1-203ENST00000594504 GRAMD1BQ3KR37 738 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 C6orf10Q5SRN2 563 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 ATAD3BQ5T9A4 648 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 EEF1A1P5Q5VTE0 462 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 TNFAIP8L2Q6P589 184 aaPredicted RBP11.22□□□□□ -0.61
UPF1-203ENST00000594504 APOOLQ6UXV4 268 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 DNAJC14Q6Y2X3 702 aaPredicted RBP11.22□□□□□ -0.61
UPF1-203ENST00000594504 ZAR1Q86SH2 424 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 GALNT10Q86SR1 603 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 BIVMQ86UB2 503 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 HEATR5AQ86XA9 2040 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 MEIOBQ8N635 442 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 OR4C3Q8NH37 302 aa11.22□□□□□ -0.61
UPF1-203ENST00000594504 FNDC9Q8TBE3 224 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms