RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 TFECO14948 347 aaPredicted RBP17.94■□□□□ 0.46
LSM4-203ENST00000593829 SNAP29O95721 258 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 CLIC3O95833 236 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 BCL10O95999 233 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 SNTA1Q13424 505 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 TIGD2Q4W5G0 525 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 GTF2IRD2BQ6EKJ0 949 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 GTF2IRD2Q86UP8 949 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 SLC22A16Q86VW1 577 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 CLEC4FQ8N1N0 589 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 COX18Q8N8Q8 333 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 ADAMTS15Q8TE58 950 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 TSPAN10Q9H1Z9 355 aaPredicted RBP17.94■□□□□ 0.46
LSM4-203ENST00000593829 PIGUQ9H490 435 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 ANKUB1A6NFN9 424 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 CCDC154A6NI56 674 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 NPIPA5E9PKD4 350 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 HS6ST1O60243 411 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 CLPXO76031 633 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 GLSO94925 669 aaPredicted RBP17.93■□□□□ 0.46
LSM4-203ENST00000593829 TFPTP0C1Z6 253 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 MATN1P21941 496 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 RFX3P48380 749 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 GABARAPL2P60520 117 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 PPIAP62937 165 aaKnown RBP17.93■□□□□ 0.46
LSM4-203ENST00000593829 ELOAQ14241 798 aaKnown RBP17.93■□□□□ 0.46
LSM4-203ENST00000593829 RGS21Q2M5E4 152 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 KRTCAP3Q53RY4 240 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 SLC30A6Q6NXT4 461 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 DPP10Q8N608 796 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 VPS33AQ96AX1 596 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 OTUB1Q96FW1 271 aaPredicted RBP17.93■□□□□ 0.46
LSM4-203ENST00000593829 GPR137Q96N19 417 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 INPP5KQ9BT40 448 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 CHID1Q9BWS9 393 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 ZFP64Q9NPA5 681 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 KLRF1Q9NZS2 232 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 SEC14L3Q9UDX4 400 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 NPIPA1Q9UND3 350 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 EXPH5Q8NEV8 1989 aa17.93■□□□□ 0.46
LSM4-203ENST00000593829 PRAMEF25A6NGN4 478 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 RFXANKO14593 260 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 TRIM3O75382 744 aaPredicted RBP17.92■□□□□ 0.46
LSM4-203ENST00000593829 WISP1O95388 367 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 CYP4B1P13584 511 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 POLR2IP36954 125 aaKnown RBP17.92■□□□□ 0.46
LSM4-203ENST00000593829 EPS8Q12929 822 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 DAG1Q14118 895 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 NEDD8Q15843 81 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 XAF1Q6GPH4 301 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 HDAC2Q92769 488 aaKnown RBP17.92■□□□□ 0.46
LSM4-203ENST00000593829 SLC35G5Q96KT7 338 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 JSRP1Q96MG2 331 aaPredicted RBP17.92■□□□□ 0.46
LSM4-203ENST00000593829 NEURL2Q9BR09 285 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 SLC35A5Q9BS91 424 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 BTBD2Q9BX70 525 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 NANOGQ9H9S0 305 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 SERHLQ9NQF3 203 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 PCDHGB3Q9Y5G1 929 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 NUP214P35658 2090 aaPredicted RBP17.92■□□□□ 0.46
LSM4-203ENST00000593829 FAM166BA8MTA8 275 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 ASNA1O43681 348 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 ICOSLGO75144 302 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 DEAF1O75398 565 aaPredicted RBP17.92■□□□□ 0.46
LSM4-203ENST00000593829 KCNK2O95069 426 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 ZNF182P17025 639 aaPredicted RBP17.92■□□□□ 0.46
LSM4-203ENST00000593829 GNLYP22749 145 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 CHI3L1P36222 383 aaPredicted RBP17.92■□□□□ 0.46
LSM4-203ENST00000593829 MASP1P48740 699 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 MAN2A2P49641 1150 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 POU6F2P78424 691 aaPredicted RBP17.92■□□□□ 0.46
LSM4-203ENST00000593829 MRPL49Q13405 166 aaKnown RBP17.92■□□□□ 0.46
LSM4-203ENST00000593829 HYAL4Q2M3T9 481 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 RABL3Q5HYI8 236 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 ZNF621Q6ZSS3 439 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 CDS1Q92903 461 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 NTNG2Q96CW9 530 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 NEURL3Q96EH8 262 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 AURKBQ96GD4 344 aaPredicted RBP17.92■□□□□ 0.46
LSM4-203ENST00000593829 ITCHQ96J02 903 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 BCL7BQ9BQE9 202 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 NTN4Q9HB63 628 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 EML6Q6ZMW3 1958 aa17.92■□□□□ 0.46
LSM4-203ENST00000593829 DUXAA6NLW8 204 aa17.91■□□□□ 0.46
LSM4-203ENST00000593829 WISP2O76076 250 aa17.91■□□□□ 0.46
LSM4-203ENST00000593829 IGKV1D-16P01601 117 aa17.91■□□□□ 0.46
LSM4-203ENST00000593829 CDKN2CP42773 168 aa17.91■□□□□ 0.46
LSM4-203ENST00000593829 UQCRFS1P47985 274 aa17.91■□□□□ 0.46
LSM4-203ENST00000593829 RPS26P62854 115 aaKnown RBP17.91■□□□□ 0.46
LSM4-203ENST00000593829 PAGE3Q5JUK9 113 aa17.91■□□□□ 0.46
LSM4-203ENST00000593829 TTC23Q5W5X9 447 aa17.91■□□□□ 0.46
LSM4-203ENST00000593829 SAXO2Q658L1 398 aa17.91■□□□□ 0.46
LSM4-203ENST00000593829 GFRALQ6UXV0 394 aa17.91■□□□□ 0.46
LSM4-203ENST00000593829 THAP5Q7Z6K1 395 aa17.91■□□□□ 0.46
LSM4-203ENST00000593829 TMEM41AQ96HV5 264 aa17.91■□□□□ 0.46
LSM4-203ENST00000593829 NSMCE2Q96MF7 247 aa17.91■□□□□ 0.46
LSM4-203ENST00000593829 OR7D2Q96RA2 312 aa17.91■□□□□ 0.46
LSM4-203ENST00000593829 GALNT9Q9HCQ5 603 aa17.91■□□□□ 0.46
LSM4-203ENST00000593829 LRRC3CA6NJW4 275 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 ALPLP05186 524 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms