RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.52□□□□□ -0.09
LIG1-205ENST00000593425 KANK2Q63ZY3 851 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 HEPHL1Q6MZM0 1159 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 LRIG3Q6UXM1 1119 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 RNF165Q6ZSG1 346 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 MTERF4Q7Z6M4 381 aaKnown RBP14.52□□□□□ -0.09
LIG1-205ENST00000593425 IFT20Q8IY31 132 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 ATP6V1C2Q8NEY4 427 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 SMAP2Q8WU79 429 aaPredicted RBP14.52□□□□□ -0.09
LIG1-205ENST00000593425 TRMT61AQ96FX7 289 aaKnown RBP14.52□□□□□ -0.09
LIG1-205ENST00000593425 STACQ99469 402 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 REPIN1Q9BWE0 567 aaKnown RBP14.52□□□□□ -0.09
LIG1-205ENST00000593425 GATA5Q9BWX5 397 aaPredicted RBP14.52□□□□□ -0.09
LIG1-205ENST00000593425 PIGUQ9H490 435 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 ESRP2Q9H6T0 727 aaKnown RBP14.52□□□□□ -0.09
LIG1-205ENST00000593425 DUSP22Q9NRW4 184 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 ING1Q9UK53 422 aaPredicted RBP14.52□□□□□ -0.09
LIG1-205ENST00000593425 LIPT1Q9Y234 373 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 CARD8Q9Y2G2 431 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 DNAJC15Q9Y5T4 150 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 KCNE3Q9Y6H6 103 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 TMEM233B4DJY2 109 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 ZNF814B7Z6K7 855 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 NDUFS7O75251 213 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 PRKD3O94806 890 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 HSPA4LO95757 839 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 IGHV4-39P01824 125 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 THBS1P07996 1170 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 BCKDHAP12694 445 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 PRKCAP17252 672 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 ENPP1P22413 925 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 EDNRAP25101 427 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 IDUAP35475 653 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 CCT5P48643 541 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 BSPH1Q075Z2 132 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 FAPQ12884 760 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 PCLAFQ15004 111 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 MLC1Q15049 377 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 ETFDHQ16134 617 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 PGGHGQ32M88 737 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 ZNF672Q499Z4 452 aaPredicted RBP14.51□□□□□ -0.09
LIG1-205ENST00000593425 CDC73Q6P1J9 531 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 C10orf107Q8IVU9 208 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 OR7A2PQ8NGA2 310 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 ZFP90Q8TF47 636 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 HSD17B8Q92506 261 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 KISS1RQ969F8 398 aaPredicted RBP14.51□□□□□ -0.09
LIG1-205ENST00000593425 GTPBP3Q969Y2 492 aaKnown RBP14.51□□□□□ -0.09
LIG1-205ENST00000593425 MTERF3Q96E29 417 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 POTEKPQ9BYX7 375 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 SLCO5A1Q9H2Y9 848 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 CXorf36Q9H7Y0 433 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 ANKZF1Q9H8Y5 726 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 TIGARQ9NQ88 270 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 GIMAP2Q9UG22 337 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 PRSS50Q9UI38 385 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 TMED5Q9Y3A6 229 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 ACTL7BQ9Y614 415 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 GPC6Q9Y625 555 aaPredicted RBP14.51□□□□□ -0.09
LIG1-205ENST00000593425 RTTNQ86VV8 2226 aa14.51□□□□□ -0.09
LIG1-205ENST00000593425 FBN1P35555 2871 aaKnown RBP14.51□□□□□ -0.09
LIG1-205ENST00000593425 A0A1W2PNR3 127 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 A0A1W2PP18 115 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 DPRXA6NFQ7 191 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 GJE1A6NN92 205 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 KIF2AO00139 706 aaPredicted RBP14.5□□□□□ -0.09
LIG1-205ENST00000593425 SCAMP2O15127 329 aaKnown RBP14.5□□□□□ -0.09
LIG1-205ENST00000593425 YES1P07947 543 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 ATP6V1C1P21283 382 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 ASMTP46597 345 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 SUMO3P55854 103 aaPredicted RBP14.5□□□□□ -0.09
LIG1-205ENST00000593425 ITGADQ13349 1161 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 KLHL26Q53HC5 615 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 DCST2Q5T1A1 773 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 DNM1P46Q6ZS02 220 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 BHLHA15Q7RTS1 189 aaPredicted RBP14.5□□□□□ -0.09
LIG1-205ENST00000593425 TDRPQ86YL5 185 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 C4orf33Q8N1A6 199 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 PIWIL2Q8TC59 973 aaKnown RBP14.5□□□□□ -0.09
LIG1-205ENST00000593425 GPR119Q8TDV5 335 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 PSD2Q9BQI7 771 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 TRIM2Q9C040 744 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 BCO1Q9HAY6 547 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 GP6Q9HCN6 339 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 NGBQ9NPG2 151 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 ATP6V1HQ9UI12 483 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 GDF2Q9UK05 429 aaPredicted RBP14.5□□□□□ -0.09
LIG1-205ENST00000593425 SNX8Q9Y5X2 465 aa14.5□□□□□ -0.09
LIG1-205ENST00000593425 CUBNO60494 3623 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 SMIM23A6NLE4 172 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 NPIPB9F8W1W9 429 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 COPEO14579 308 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 RAMP1O60894 148 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 ADAM11O75078 769 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 LYZL6O75951 148 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 CHRNGP07510 517 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 LAMP1P11279 417 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 SELENBP1Q13228 472 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 TP53BP2Q13625 1128 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 P2RY6Q15077 328 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms