RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 ICAM5Q9UMF0 924 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 FAF1Q9UNN5 650 aaPredicted RBP18.25■□□□□ 0.51
TRIM47-207ENST00000593089 ABCA2Q9BZC7 2435 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 ROS1P08922 2347 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 FN1P02751 2386 aaKnown RBP18.24■□□□□ 0.51
TRIM47-207ENST00000593089 H3BNH8 94 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 ZNF195O14628 629 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 SKAP2O75563 359 aaPredicted RBP18.24■□□□□ 0.51
TRIM47-207ENST00000593089 ZNF844Q08AG5 666 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 TSC22D1Q15714 1073 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 TOMM34Q15785 309 aaPredicted RBP18.24■□□□□ 0.51
TRIM47-207ENST00000593089 TMEM176BQ3YBM2 270 aaPredicted RBP18.24■□□□□ 0.51
TRIM47-207ENST00000593089 KLHL26Q53HC5 615 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRIM47-207ENST00000593089 IL23RQ5VWK5 629 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 NUFIP2Q7Z417 695 aaKnown RBP18.24■□□□□ 0.51
TRIM47-207ENST00000593089 TUSC5Q8IXB3 177 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 KRTCAP2Q8N6L1 136 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 RFWD2Q8NHY2 731 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 IGFBPL1Q8WX77 278 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 S100PBPQ96BU1 408 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 C3orf30Q96M34 536 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 OR10A4Q9H209 315 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 ATAD3AQ9NVI7 634 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 GPATCH2Q9NW75 528 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 PRR14LQ5THK1 2151 aa18.24■□□□□ 0.51
TRIM47-207ENST00000593089 NUP214P35658 2090 aaPredicted RBP18.23■□□□□ 0.51
TRIM47-207ENST00000593089 GJE1A6NN92 205 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 GTPBP1O00178 669 aaKnown RBP18.23■□□□□ 0.51
TRIM47-207ENST00000593089 HS3ST1O14792 307 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 CNOT4O95628 575 aaKnown RBP18.23■□□□□ 0.51
TRIM47-207ENST00000593089 KRT16P08779 473 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 NID1P14543 1247 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 ADH6P28332 368 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 PCSK6P29122 969 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 ATP12AP54707 1039 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 RNPS1Q15287 305 aaKnown RBP18.23■□□□□ 0.51
TRIM47-207ENST00000593089 LSM12Q3MHD2 195 aaKnown RBP18.23■□□□□ 0.51
TRIM47-207ENST00000593089 C6orf136Q5SQH8 315 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 FCRLAQ7L513 359 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 ZNF611Q8N823 705 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 FNDC5Q8NAU1 212 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 STEAP2Q8NFT2 490 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 OR5AK3PQ8NH89 298 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 PSMA8Q8TAA3 256 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 TCP10LQ8TDR4 215 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 TACO1Q9BSH4 297 aaKnown RBP18.23■□□□□ 0.51
TRIM47-207ENST00000593089 TMEM204Q9BSN7 226 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 CXorf56Q9H5V9 222 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 ANKZF1Q9H8Y5 726 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 KLHL13Q9P2N7 655 aa18.23■□□□□ 0.51
TRIM47-207ENST00000593089 GPC6Q9Y625 555 aaPredicted RBP18.23■□□□□ 0.51
TRIM47-207ENST00000593089 CFLARO15519 480 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 GCM2O75603 506 aaPredicted RBP18.22■□□□□ 0.51
TRIM47-207ENST00000593089 LYPLA1O75608 230 aaPredicted RBP18.22■□□□□ 0.51
TRIM47-207ENST00000593089 PRKCAP17252 672 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 ARRB2P32121 409 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 SOAT1P35610 550 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 SUMO3P55854 103 aaPredicted RBP18.22■□□□□ 0.51
TRIM47-207ENST00000593089 TFAP2EQ6VUC0 442 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 RIBC1Q8N443 379 aaPredicted RBP18.22■□□□□ 0.51
TRIM47-207ENST00000593089 NATD1Q8N6N6 113 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 TMCO5AQ8N6Q1 288 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 OR5D16Q8NGK9 328 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 RAB3IL1Q8TBN0 382 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 GPR119Q8TDV5 335 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 ZFP90Q8TF47 636 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 AKAP1Q92667 903 aaKnown RBP eCLIP18.22■□□□□ 0.51
TRIM47-207ENST00000593089 COQ8BQ96D53 544 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 OR7D2Q96RA2 312 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 PRPF18Q99633 342 aaKnown RBP18.22■□□□□ 0.51
TRIM47-207ENST00000593089 COQ10BQ9H8M1 238 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 ZDHHC2Q9UIJ5 367 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 DTNAQ9Y4J8 743 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 ACTL7BQ9Y614 415 aa18.22■□□□□ 0.51
TRIM47-207ENST00000593089 IGHV3-15A0A0B4J1V0 119 aa18.21■□□□□ 0.51
TRIM47-207ENST00000593089 PRKD3O94806 890 aa18.21■□□□□ 0.51
TRIM47-207ENST00000593089 IL32P24001 234 aa18.21■□□□□ 0.51
TRIM47-207ENST00000593089 CCR4P51679 360 aa18.21■□□□□ 0.51
TRIM47-207ENST00000593089 GABRG1Q8N1C3 465 aa18.21■□□□□ 0.51
TRIM47-207ENST00000593089 ZNF619Q8N2I2 560 aa18.21■□□□□ 0.51
TRIM47-207ENST00000593089 SFXN5Q8TD22 340 aa18.21■□□□□ 0.51
TRIM47-207ENST00000593089 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.21■□□□□ 0.51
TRIM47-207ENST00000593089 MOAP1Q96BY2 351 aa18.21■□□□□ 0.51
TRIM47-207ENST00000593089 ZNF524Q96C55 264 aa18.21■□□□□ 0.51
TRIM47-207ENST00000593089 DUSP26Q9BV47 211 aa18.21■□□□□ 0.51
TRIM47-207ENST00000593089 HDHD5Q9BXW7 423 aa18.21■□□□□ 0.51
TRIM47-207ENST00000593089 LAMP3Q9UQV4 416 aa18.21■□□□□ 0.51
TRIM47-207ENST00000593089 DNHD1Q96M86 4753 aa18.2■□□□□ 0.5
TRIM47-207ENST00000593089 FREM1Q5H8C1 2179 aa18.2■□□□□ 0.5
TRIM47-207ENST00000593089 A0A1W2PNR3 127 aa18.2■□□□□ 0.5
TRIM47-207ENST00000593089 NPIPB9F8W1W9 429 aa18.2■□□□□ 0.5
TRIM47-207ENST00000593089 PAX1P15863 534 aa18.2■□□□□ 0.5
TRIM47-207ENST00000593089 ENPP1P22413 925 aa18.2■□□□□ 0.5
TRIM47-207ENST00000593089 SLC7A1P30825 629 aa18.2■□□□□ 0.5
TRIM47-207ENST00000593089 ATP5J2P56134 94 aa18.2■□□□□ 0.5
TRIM47-207ENST00000593089 RPS26P62854 115 aaKnown RBP18.2■□□□□ 0.5
TRIM47-207ENST00000593089 SFRP5Q5T4F7 317 aa18.2■□□□□ 0.5
TRIM47-207ENST00000593089 TOR1AIP2Q8NFQ8 470 aa18.2■□□□□ 0.5
TRIM47-207ENST00000593089 TUBGCP3Q96CW5 907 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms