RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 PSMD4P55036 377 aaKnown RBP8.77□□□□□ -1.01
DDX39A-220ENST00000593008 RPP38P78345 283 aaKnown RBP8.77□□□□□ -1.01
DDX39A-220ENST00000593008 TXNL4AP83876 142 aaKnown RBP8.77□□□□□ -1.01
DDX39A-220ENST00000593008 ALDH6A1Q02252 535 aaKnown RBP8.77□□□□□ -1.01
DDX39A-220ENST00000593008 FOXD4Q12950 439 aaPredicted RBP8.77□□□□□ -1.01
DDX39A-220ENST00000593008 BNIP2Q12982 314 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 VEZF1Q14119 521 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 LIN52Q52LA3 116 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 C1QL3Q5VWW1 255 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 SLC22A10Q63ZE4 541 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 LCN8Q6JVE9 175 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 ARSKQ6UWY0 536 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 ZNF771Q7L3S4 317 aaPredicted RBP8.77□□□□□ -1.01
DDX39A-220ENST00000593008 YTHDF3Q7Z739 585 aaKnown RBP8.77□□□□□ -1.01
DDX39A-220ENST00000593008 GPALPP1Q8IXQ4 340 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 GOLM1Q8NBJ4 401 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 FAM71CQ8NEG0 241 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 OR2M3Q8NG83 312 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 DUSP19Q8WTR2 217 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 SSC4DQ8WTU2 575 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 TMCO6Q96DC7 493 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 ASB9Q96DX5 294 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 NSMCE2Q96MF7 247 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 FRMD6Q96NE9 622 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 GNRHR2Q96P88 292 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 DSN1Q9H410 356 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 MTHFD2LQ9H903 347 aaPredicted RBP8.77□□□□□ -1.01
DDX39A-220ENST00000593008 TIMMDC1Q9NPL8 285 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 POLE3Q9NRF9 147 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 THUMPD1Q9NXG2 353 aaKnown RBP8.77□□□□□ -1.01
DDX39A-220ENST00000593008 SEC14L3Q9UDX4 400 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 MAGEL2Q9UJ55 1249 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 SH3BGRL2Q9UJC5 107 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 MRTO4Q9UKD2 239 aaKnown RBP8.77□□□□□ -1.01
DDX39A-220ENST00000593008 ABCG2Q9UNQ0 655 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 PCDHGB6Q9Y5F9 930 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 MED12Q93074 2177 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 SVILO95425 2214 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 DOPEY2Q9Y3R5 2298 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 USP9YO00507 2555 aaPredicted RBP8.76□□□□□ -1.01
DDX39A-220ENST00000593008 NAV2Q8IVL1 2488 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 A1L4Q6 167 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 CDHR4A6H8M9 788 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 J3KTA2 159 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 hCG_2039718K7EN88 272 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 LRRTM2O43300 516 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 NDUFB5O43674 189 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 DIRAS1O95057 198 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 CSTAP01040 98 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 NGFRP08138 427 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 NID1P14543 1247 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 IL7RP16871 459 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 ZNF24P17028 368 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 IL11P20809 199 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 PRKAR1BP31321 381 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 ZNF136P52737 540 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 HSF1Q00613 529 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 FLOT2Q14254 428 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 TRIM25Q14258 630 aaKnown RBP8.76□□□□□ -1.01
DDX39A-220ENST00000593008 KPNB1Q14974 876 aaKnown RBP8.76□□□□□ -1.01
DDX39A-220ENST00000593008 RNF220Q5VTB9 566 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 PRAMEF8Q5VWM4 474 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 PRAMEF7Q5VXH5 474 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 DHRS4L2Q6PKH6 230 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 PATL1Q86TB9 770 aaKnown RBP8.76□□□□□ -1.01
DDX39A-220ENST00000593008 FJX1Q86VR8 437 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 CARM1Q86X55 608 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 DHFR2Q86XF0 187 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 PEX5LQ8IYB4 626 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 FAM98AQ8NCA5 519 aaKnown RBP8.76□□□□□ -1.01
DDX39A-220ENST00000593008 OR6T1Q8NGN1 323 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 DNAJA3Q96EY1 480 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 SGCZQ96LD1 299 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 SEPHS2Q99611 448 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 ARHGDIGQ99819 225 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 TTTY12Q9BZ98 90 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 ZNF703Q9H7S9 590 aaPredicted RBP8.76□□□□□ -1.01
DDX39A-220ENST00000593008 CALML5Q9NZT1 146 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 PPP4R1LQ9P1A2 415 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 ACTR3BQ9P1U1 418 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 TNFRSF10DQ9UBN6 386 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 ICAM5Q9UMF0 924 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 VDAC3Q9Y277 283 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 SLC5A6Q9Y289 635 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 AP3M1Q9Y2T2 418 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 KLF13Q9Y2Y9 288 aaPredicted RBP8.76□□□□□ -1.01
DDX39A-220ENST00000593008 SH3GLB1Q9Y371 365 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 SPTAN1Q13813 2472 aaKnown RBP8.76□□□□□ -1.01
DDX39A-220ENST00000593008 NINQ8N4C6 2090 aa8.76□□□□□ -1.01
DDX39A-220ENST00000593008 PCNX3Q9H6A9 2034 aa8.75□□□□□ -1.01
DDX39A-220ENST00000593008 TRGV8A0A0C4DH27 118 aa8.75□□□□□ -1.01
DDX39A-220ENST00000593008 A0A1W2PQD3 144 aa8.75□□□□□ -1.01
DDX39A-220ENST00000593008 KLRC4-KLRK1H3BQV0 150 aa8.75□□□□□ -1.01
DDX39A-220ENST00000593008 RRP9O43818 475 aaKnown RBP8.75□□□□□ -1.01
DDX39A-220ENST00000593008 GLSO94925 669 aaPredicted RBP8.75□□□□□ -1.01
DDX39A-220ENST00000593008 THY1P04216 161 aa8.75□□□□□ -1.01
DDX39A-220ENST00000593008 SEMG1P04279 462 aa8.75□□□□□ -1.01
DDX39A-220ENST00000593008 FESP07332 822 aa8.75□□□□□ -1.01
DDX39A-220ENST00000593008 THBS1P07996 1170 aa8.75□□□□□ -1.01
DDX39A-220ENST00000593008 GUSBP08236 651 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms