RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	C16orf45	Q96MC5	204 aa	Predicted RBP	16.18	■□□□□ 0.18
CIRBP-238	ENST00000592412	HS6ST2	Q96MM7	605 aa		16.18	■□□□□ 0.18
CIRBP-238	ENST00000592412	PSD2	Q9BQI7	771 aa		16.18	■□□□□ 0.18
CIRBP-238	ENST00000592412	BCO1	Q9HAY6	547 aa		16.18	■□□□□ 0.18
CIRBP-238	ENST00000592412	SIRT3	Q9NTG7	399 aa	Predicted RBP	16.18	■□□□□ 0.18
CIRBP-238	ENST00000592412	CISD1	Q9NZ45	108 aa	Known RBP	16.18	■□□□□ 0.18
CIRBP-238	ENST00000592412	ICAM5	Q9UMF0	924 aa		16.18	■□□□□ 0.18
CIRBP-238	ENST00000592412	NPIPA5	A0A0B4J1W7	369 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	GOLGA8Q	A0A0J9YX86	632 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	GOLGA8O	A6NCC3	632 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	NPIPA7	E9PJI5	369 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	GOLGA8N	F8WBI6	632 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	AKAP10	O43572	662 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	SSX4	O60224	188 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	SEC22B	O75396	215 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	GSTA1	P08263	222 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	ABHD2	P08910	425 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	NPIPA8	P0DM63	369 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	PYGB	P11216	843 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	HPGD	P15428	266 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	OR3A2	P47893	321 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	IRX1	P78414	480 aa	Predicted RBP	16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	CLEC6A	Q6EIG7	209 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	C11orf71	Q6IPW1	123 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	ZYG11A	Q6WRX3	759 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412		Q6ZSR9	355 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	COX18	Q8N8Q8	333 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	OR10H5	Q8NGA6	315 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	CLHC1	Q8NHS4	586 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	ZFP90	Q8TF47	636 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	FAM120B	Q96EK7	910 aa	Known RBP	16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	REXO5	Q96IC2	774 aa	Known RBP	16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	METTL2A	Q96IZ6	378 aa	Known RBP	16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	REEP4	Q9H6H4	257 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	BARX1	Q9HBU1	254 aa	Predicted RBP	16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	TIGAR	Q9NQ88	270 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	RRAGD	Q9NQL2	400 aa	Predicted RBP	16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	ACTL7B	Q9Y614	415 aa		16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	YLPM1	P49750	1951 aa	Known RBP	16.17	■□□□□ 0.18
CIRBP-238	ENST00000592412	ALOX5	P09917	674 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	FAM157C	P0CG43	387 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	PRKCA	P17252	672 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	SERPINB4	P48594	390 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	CDH11	P55287	796 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	POU6F2	P78424	691 aa	Predicted RBP	16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	TMEM249	Q2WGJ8	235 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	NDUFAF6	Q330K2	333 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	KLHL26	Q53HC5	615 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	ZCCHC12	Q6PEW1	402 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	ZFP28	Q8NHY6	868 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	PHOSPHO1	Q8TCT1	267 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	GPR119	Q8TDV5	335 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	ACMSD	Q8TDX5	336 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	ZNF75CP	Q92670	426 aa	Predicted RBP	16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	CDS1	Q92903	461 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	PPCDC	Q96CD2	204 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	TSSK3	Q96PN8	268 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	CCT7	Q99832	543 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	BTBD2	Q9BX70	525 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	ANKZF1	Q9H8Y5	726 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	ACSS1	Q9NUB1	689 aa	Predicted RBP	16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	C1orf109	Q9NX04	203 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	GIN1	Q9NXP7	522 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	BAIAP2L1	Q9UHR4	511 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	CARD8	Q9Y2G2	431 aa		16.16	■□□□□ 0.18
CIRBP-238	ENST00000592412	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	16.16	■□□□□ 0.18	1e-14	■■■■□ 24.1
CIRBP-238	ENST00000592412		A0A1W2PNR3	127 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412		C9JVG2	144 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	ABCD4	O14678	606 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	SMAD9	O15198	467 aa	Known RBP	16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	RGS14	O43566	566 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	F12	P00748	615 aa	Predicted RBP	16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	PROC	P04070	461 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	HMGN2	P05204	90 aa	Known RBP	16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	UROS	P10746	265 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	COX5A	P20674	150 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	IGHV1-2	P23083	117 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	P2RX1	P51575	399 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	PPA1	Q15181	289 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	STK11	Q15831	433 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	RFTN2	Q52LD8	501 aa	Predicted RBP	16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	MTERF4	Q7Z6M4	381 aa	Known RBP	16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	SLC43A2	Q8N370	569 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	ATP6V1C2	Q8NEY4	427 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	JADE3	Q92613	823 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	ZNF775	Q96BV0	537 aa	Predicted RBP	16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	ZNF300	Q96RE9	604 aa	Predicted RBP	16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	USB1	Q9BQ65	265 aa	Known RBP	16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	TUBB1	Q9H4B7	451 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	ALG2	Q9H553	416 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	DUSP22	Q9NRW4	184 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	SH3BP4	Q9P0V3	963 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	GPC6	Q9Y625	555 aa	Predicted RBP	16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	KCNE3	Q9Y6H6	103 aa		16.15	■□□□□ 0.18
CIRBP-238	ENST00000592412	FAM234B	A2RU67	622 aa		16.14	■□□□□ 0.17
CIRBP-238	ENST00000592412	ESPN	B1AK53	854 aa		16.14	■□□□□ 0.17
CIRBP-238	ENST00000592412		E7EQL1	145 aa		16.14	■□□□□ 0.17
CIRBP-238	ENST00000592412	NPIPB9	F8W1W9	429 aa		16.14	■□□□□ 0.17
CIRBP-238	ENST00000592412	KIF2A	O00139	706 aa	Predicted RBP	16.14	■□□□□ 0.17

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