RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 FAM47E-STBD1D6RA91 191 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 LINC01387J3KSC0 135 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 ETV2O00321 342 aaPredicted RBP16.39■□□□□ 0.21
DDX39A-212ENST00000590260 TNFSF13O75888 250 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 H6PDO95479 791 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 TMIGD3P0DMS9 266 aaPredicted RBP16.39■□□□□ 0.21
DDX39A-212ENST00000590260 NID1P14543 1247 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 CTSSP25774 331 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 PGM1P36871 562 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 KRTAP10-9P60411 292 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 LRRC74AQ0VAA2 488 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 FGFBP1Q14512 234 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 SF3B4Q15427 424 aaKnown RBP eCLIP16.39■□□□□ 0.213e-6■■■■□ 23.8
DDX39A-212ENST00000590260 PAGE3Q5JUK9 113 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 CGB2Q6NT52 195 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 C10orf111Q8N326 155 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 STON2Q8WXE9 905 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 SMPDL3BQ92485 455 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 INTS12Q96CB8 462 aaKnown RBP16.39■□□□□ 0.21
DDX39A-212ENST00000590260 SLC25A37Q9NYZ2 338 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 WDR45Q9Y484 360 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 TEX15Q9BXT5 2789 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 CSMD1Q96PZ7 3565 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 CSMD2Q7Z408 3487 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 A0A0J9YW62 118 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 ZNF264O43296 627 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 AGR2O95994 175 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 UBL4AP11441 157 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 ETFAP13804 333 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 PRKCAP17252 672 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 SLC6A8P48029 635 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 GUSBP1Q15486 140 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 FBXL19-AS1Q494R0 122 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 SLC25A53Q5H9E4 307 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 ZNF619Q8N2I2 560 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 MEIOBQ8N635 442 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 TRIML2Q8N7C3 387 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 FBXO27Q8NI29 283 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 FNDC9Q8TBE3 224 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 PINK1Q9BXM7 581 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 TMEM185BQ9H7F4 350 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 TPT1P8Q9HAU6 139 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 POLE3Q9NRF9 147 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 PCDHB14Q9Y5E9 798 aa16.38■□□□□ 0.21
DDX39A-212ENST00000590260 INTS1Q8N201 2190 aaKnown RBP16.37■□□□□ 0.21
DDX39A-212ENST00000590260 NAV2Q8IVL1 2488 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 TRBV5-3A0A0A0MS03 114 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 SYT5O00445 386 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 DVL2O14641 736 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 EIF4E2O60573 245 aaKnown RBP16.37■□□□□ 0.21
DDX39A-212ENST00000590260 AQP8O94778 261 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 IL18BPO95998 194 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 NUDT7P0C024 238 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 RPS4Y1P22090 263 aaKnown RBP16.37■□□□□ 0.21
DDX39A-212ENST00000590260 ATP4BP51164 291 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 ZNF41P51814 821 aaPredicted RBP16.37■□□□□ 0.21
DDX39A-212ENST00000590260 SUMO3P55854 103 aaPredicted RBP16.37■□□□□ 0.21
DDX39A-212ENST00000590260 GPAT3Q53EU6 434 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 LRIF1Q5T3J3 769 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 ATAD3BQ5T9A4 648 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 GRAMD2AQ8IUY3 354 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 OR5W2Q8NH69 310 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 ITCHQ96J02 903 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 TRNT1Q96Q11 434 aaKnown RBP16.37■□□□□ 0.21
DDX39A-212ENST00000590260 TM9SF2Q99805 663 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 THUMPD3Q9BV44 507 aaKnown RBP16.37■□□□□ 0.21
DDX39A-212ENST00000590260 RSPO3Q9BXY4 272 aaPredicted RBP16.37■□□□□ 0.21
DDX39A-212ENST00000590260 LAT2Q9GZY6 243 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 HHATLQ9HCP6 504 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 NPHS2Q9NP85 383 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 CCDC167Q9P0B6 97 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 DCTN4Q9UJW0 460 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 LRBAP50851 2863 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 DSPPQ9NZW4 1301 aa16.37■□□□□ 0.21
DDX39A-212ENST00000590260 PKDREJQ9NTG1 2253 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 A0A1W2PNV4 684 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 SLC22A20A6NK97 555 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 GTPBP1O00178 669 aaKnown RBP16.36■□□□□ 0.21
DDX39A-212ENST00000590260 ADAMDEC1O15204 470 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 CSTAP01040 98 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 TFPTP0C1Z6 253 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 UBTFL6P0CB48 400 aaPredicted RBP16.36■□□□□ 0.21
DDX39A-212ENST00000590260 ASCL1P50553 236 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 RAC1P63000 192 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 PON3Q15166 354 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 QPRTQ15274 297 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 VWA1Q6PCB0 445 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 LRRC74BQ6ZQY2 392 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 OR10D3Q8NH80 312 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 SPDL1Q96EA4 605 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 RMND5AQ9H871 391 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 RNF122Q9H9V4 155 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 CHST2Q9Y4C5 530 aa16.36■□□□□ 0.21
DDX39A-212ENST00000590260 UQCRHLA0A096LP55 91 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 A0A096LPI6 279 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 AGAP5A6NIR3 686 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 H3BNH8 94 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 NR5A2O00482 541 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 EIF1AYO14602 144 aaKnown RBP16.35■□□□□ 0.21
DDX39A-212ENST00000590260 TNFSF11O14788 317 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms