RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CARD8Q9Y2G2 431 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 YBX2Q9Y2T7 364 aaKnown RBP6.87□□□□□ -1.31
ZNF540-206ENST00000589117 MED31Q9Y3C7 131 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 CKAP5Q14008 2032 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 A0A0J9YY10 115 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 LOC100289279A0A1B0GTE1 492 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 PRAMEF26H0Y7S4 382 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 H0YGG7 62 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 OR10H2O60403 315 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 CTSVO60911 334 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 KCNK2O95069 426 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 LIMS3P0CW19 117 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 LIMS4P0CW20 117 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 CELP19835 753 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 F8A1P23610 371 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 ARF3P61204 181 aaPredicted RBP6.87□□□□□ -1.31
ZNF540-206ENST00000589117 POU6F2P78424 691 aaPredicted RBP6.87□□□□□ -1.31
ZNF540-206ENST00000589117 RUNX2Q13950 521 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 GPR18Q14330 331 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 PYDC2Q56P42 97 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF628Q5EBL2 1059 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 TRIM61Q5EBN2 209 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 C9orf50Q5SZB4 431 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 MZT2BQ6NZ67 158 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF613Q6PF04 617 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF517Q6ZMY9 492 aaPredicted RBP6.87□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF836Q6ZNA1 936 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 WDR53Q7Z5U6 358 aaPredicted RBP6.87□□□□□ -1.31
ZNF540-206ENST00000589117 C11orf74Q86VG3 221 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 OR4N5Q8IXE1 308 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 GPALPP1Q8IXQ4 340 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 VWA5B2Q8N398 1253 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 OR8D4Q8NGM9 314 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 TMEM255BQ8WV15 326 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 ASB15Q8WXK1 588 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 ACOT12Q8WYK0 555 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 RPP25Q9BUL9 199 aaKnown RBP6.87□□□□□ -1.31
ZNF540-206ENST00000589117 UBQLN3Q9H347 655 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 ABCB9Q9NP78 766 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 HRASLS2Q9NWW9 162 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 SIDT1Q9NXL6 827 aaKnown RBP6.87□□□□□ -1.31
ZNF540-206ENST00000589117 CPNE7Q9UBL6 633 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 PILRAQ9UKJ1 303 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 MRPS33Q9Y291 106 aaKnown RBP6.87□□□□□ -1.31
ZNF540-206ENST00000589117 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.86□□□□□ -1.31
ZNF540-206ENST00000589117 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.86□□□□□ -1.31
ZNF540-206ENST00000589117 A0A1W2PS29 197 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 DAPL1A0PJW8 107 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 CDHR4A6H8M9 788 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 A6NCN8 305 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 RIIAD1A6NNX1 92 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 PRR23D1E9PI22 279 aaPredicted RBP6.86□□□□□ -1.31
ZNF540-206ENST00000589117 HCN1O60741 890 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 EML2O95834 649 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 EGFP01133 1207 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 IFNGP01579 166 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 IGHA1P01876 353 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 PRR23D2P0DMB1 279 aaPredicted RBP6.86□□□□□ -1.31
ZNF540-206ENST00000589117 SAGP10523 405 aaPredicted RBP6.86□□□□□ -1.31
ZNF540-206ENST00000589117 IL7P13232 177 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 CD53P19397 219 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 RPS5P46782 204 aaKnown RBP6.86□□□□□ -1.31
ZNF540-206ENST00000589117 INPP1P49441 399 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 BLKP51451 505 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 GAS1P54826 345 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 TAS2R43P59537 309 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 HOXC5Q00444 222 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 HYAL1Q12794 435 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 SELENBP1Q13228 472 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 SHHQ15465 462 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 OR1Q1Q15612 314 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 TRMT12Q53H54 448 aaKnown RBP6.86□□□□□ -1.31
ZNF540-206ENST00000589117 MRPL2Q5T653 305 aaKnown RBP6.86□□□□□ -1.31
ZNF540-206ENST00000589117 ZBTB37Q5TC79 503 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 Q6ZSR6 202 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 MEPCEQ7L2J0 689 aaKnown RBP6.86□□□□□ -1.31
ZNF540-206ENST00000589117 CPOQ8IVL8 374 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 CAMKK1Q8N5S9 505 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 CSNK1A1LQ8N752 337 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 IL17RDQ8NFM7 739 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 NEIL3Q8TAT5 605 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 FANK1Q8TC84 345 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 TM9SF4Q92544 642 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 SAMD8Q96LT4 415 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 KATNB1Q9BVA0 655 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 SRRQ9GZT4 340 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 MCOLN1Q9GZU1 580 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 OR52D1Q9H346 318 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 TBC1D17Q9HA65 648 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 TRIM36Q9NQ86 728 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 TRPV5Q9NQA5 729 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 SACM1LQ9NTJ5 587 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 PLEKHB1Q9UF11 243 aaPredicted RBP6.86□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF221Q9UK13 617 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 CBLCQ9ULV8 474 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 SF3B6Q9Y3B4 125 aaKnown RBP6.86□□□□□ -1.31
ZNF540-206ENST00000589117 CHST2Q9Y4C5 530 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 CSNK1G3Q9Y6M4 447 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 V9GYH0 126 aa6.86□□□□□ -1.31
ZNF540-206ENST00000589117 COL4A3Q01955 1670 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms