RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 RFTN2Q52LD8 501 aaPredicted RBP16.33■□□□□ 0.2
CCDC43-204ENST00000588687 KLHL26Q53HC5 615 aa16.33■□□□□ 0.2
CCDC43-204ENST00000588687 TMEM201Q5SNT2 666 aa16.33■□□□□ 0.2
CCDC43-204ENST00000588687 FCRLAQ7L513 359 aa16.33■□□□□ 0.2
CCDC43-204ENST00000588687 HIPK1Q86Z02 1210 aa16.33■□□□□ 0.2
CCDC43-204ENST00000588687 FBXO27Q8NI29 283 aa16.33■□□□□ 0.2
CCDC43-204ENST00000588687 ZFP90Q8TF47 636 aa16.33■□□□□ 0.2
CCDC43-204ENST00000588687 HSD17B8Q92506 261 aa16.33■□□□□ 0.2
CCDC43-204ENST00000588687 ANP32BQ92688 251 aaKnown RBP16.33■□□□□ 0.2
CCDC43-204ENST00000588687 CDS1Q92903 461 aa16.33■□□□□ 0.2
CCDC43-204ENST00000588687 KISS1RQ969F8 398 aaPredicted RBP16.33■□□□□ 0.2
CCDC43-204ENST00000588687 TRMT61AQ96FX7 289 aaKnown RBP16.33■□□□□ 0.2
CCDC43-204ENST00000588687 STACQ99469 402 aa16.33■□□□□ 0.2
CCDC43-204ENST00000588687 PSD2Q9BQI7 771 aa16.33■□□□□ 0.2
CCDC43-204ENST00000588687 BTBD2Q9BX70 525 aa16.33■□□□□ 0.2
CCDC43-204ENST00000588687 GRIP2Q9C0E4 1043 aa16.33■□□□□ 0.2
CCDC43-204ENST00000588687 C12orf65Q9H3J6 166 aaKnown RBP16.33■□□□□ 0.2
CCDC43-204ENST00000588687 CXorf36Q9H7Y0 433 aa16.33■□□□□ 0.2
CCDC43-204ENST00000588687 OXSMQ9NWU1 459 aa16.33■□□□□ 0.2
CCDC43-204ENST00000588687 TBK1Q9UHD2 729 aa16.33■□□□□ 0.2
CCDC43-204ENST00000588687 BAIAP2L1Q9UHR4 511 aa16.33■□□□□ 0.2
CCDC43-204ENST00000588687 NBEAL1Q6ZS30 2694 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 NPIPA5A0A0B4J1W7 369 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 SHISA9B4DS77 424 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 NPIPA7E9PJI5 369 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 KIF2AO00139 706 aaPredicted RBP16.32■□□□□ 0.2
CCDC43-204ENST00000588687 ZNF195O14628 629 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 TLX2O43763 284 aaPredicted RBP16.32■□□□□ 0.2
CCDC43-204ENST00000588687 ADAM11O75078 769 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 HSPA4LO95757 839 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 ADAP00813 363 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 HMGN2P05204 90 aaKnown RBP16.32■□□□□ 0.2
CCDC43-204ENST00000588687 FAM153BP0C7A2 387 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 NPIPA8P0DM63 369 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 PRKCAP17252 672 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 ENPP1P22413 925 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 SUMO3P55854 103 aaPredicted RBP16.32■□□□□ 0.2
CCDC43-204ENST00000588687 RPL38P63173 70 aaKnown RBP16.32■□□□□ 0.2
CCDC43-204ENST00000588687 POU6F2P78424 691 aaPredicted RBP16.32■□□□□ 0.2
CCDC43-204ENST00000588687 ITGADQ13349 1161 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 MLC1Q15049 377 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 NDUFAF6Q330K2 333 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 FAM153CQ494X1 144 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 Q6ZT83 130 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 MTERF4Q7Z6M4 381 aaKnown RBP16.32■□□□□ 0.2
CCDC43-204ENST00000588687 GIN1Q9NXP7 522 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 NPAP1Q9NZP6 1156 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 SH3BP4Q9P0V3 963 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 GDF2Q9UK05 429 aaPredicted RBP16.32■□□□□ 0.2
CCDC43-204ENST00000588687 SNX8Q9Y5X2 465 aa16.32■□□□□ 0.2
CCDC43-204ENST00000588687 GPC6Q9Y625 555 aaPredicted RBP16.32■□□□□ 0.2
CCDC43-204ENST00000588687 GOLGA8QA0A0J9YX86 632 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 A0A1W2PP18 115 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 GOLGA8OA6NCC3 632 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 ESPNB1AK53 854 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 GOLGA8NF8WBI6 632 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 SLC28A1O00337 649 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 RAMP1O60894 148 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 CRCPO75575 148 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 YES1P07947 543 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 NEFHP12036 1026 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 HPGDP15428 266 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 COX5AP20674 150 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 OR3A2P47893 321 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 P2RX1P51575 399 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 FAPQ12884 760 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 LASP1Q14847 261 aaKnown RBP16.31■□□□□ 0.2
CCDC43-204ENST00000588687 SLC25A53Q5H9E4 307 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 KANK2Q63ZY3 851 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 PSMA8Q8TAA3 256 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 PHOSPHO1Q8TCT1 267 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 GPR119Q8TDV5 335 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 JADE3Q92613 823 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 GTPBP3Q969Y2 492 aaKnown RBP16.31■□□□□ 0.2
CCDC43-204ENST00000588687 MTERF3Q96E29 417 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 PIGUQ9H490 435 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 NGBQ9NPG2 151 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 TIGARQ9NQ88 270 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 ZCCHC3Q9NUD5 404 aaKnown RBP16.31■□□□□ 0.2
CCDC43-204ENST00000588687 PRSS50Q9UI38 385 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 CARD8Q9Y2G2 431 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 DNAJC15Q9Y5T4 150 aa16.31■□□□□ 0.2
CCDC43-204ENST00000588687 YLPM1P49750 1951 aaKnown RBP16.31■□□□□ 0.2
CCDC43-204ENST00000588687 IGHV3-15A0A0B4J1V0 119 aa16.3■□□□□ 0.2
CCDC43-204ENST00000588687 SMAD9O15198 467 aaKnown RBP16.3■□□□□ 0.2
CCDC43-204ENST00000588687 RGS14O43566 566 aa16.3■□□□□ 0.2
CCDC43-204ENST00000588687 PRKD3O94806 890 aa16.3■□□□□ 0.2
CCDC43-204ENST00000588687 BCKDHAP12694 445 aa16.3■□□□□ 0.2
CCDC43-204ENST00000588687 TMEM176BQ3YBM2 270 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-204ENST00000588687 CCDC153Q494R4 210 aa16.3■□□□□ 0.2
CCDC43-204ENST00000588687 CFAP157Q5JU67 520 aa16.3■□□□□ 0.2
CCDC43-204ENST00000588687 HMBOX1Q6NT76 420 aa16.3■□□□□ 0.2
CCDC43-204ENST00000588687 CDC73Q6P1J9 531 aa16.3■□□□□ 0.2
CCDC43-204ENST00000588687 BHLHA15Q7RTS1 189 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-204ENST00000588687 NANOS1Q8WY41 292 aaKnown RBP16.3■□□□□ 0.2
CCDC43-204ENST00000588687 ZNF75CPQ92670 426 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-204ENST00000588687 REXO5Q96IC2 774 aaKnown RBP16.3■□□□□ 0.2
CCDC43-204ENST00000588687 MRGPRX4Q96LA9 322 aa16.3■□□□□ 0.2
CCDC43-204ENST00000588687 USB1Q9BQ65 265 aaKnown RBP16.3■□□□□ 0.2
CCDC43-204ENST00000588687 IQCGQ9H095 443 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms