RNA–Protein interactions for RNA: ENST00000588090.5

CIRBP-216, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-216ENST00000588090 TIMP4Q99727 224 aa21.22■□□□□ 0.99
CIRBP-216ENST00000588090 HOPXQ9BPY8 73 aaPredicted RBP21.22■□□□□ 0.99
CIRBP-216ENST00000588090 UGT2B28Q9BY64 529 aa21.22■□□□□ 0.99
CIRBP-216ENST00000588090 TP63Q9H3D4 680 aaPredicted RBP21.22■□□□□ 0.99
CIRBP-216ENST00000588090 EXOSC3Q9NQT5 275 aaKnown RBP21.22■□□□□ 0.99
CIRBP-216ENST00000588090 TNFRSF10DQ9UBN6 386 aa21.22■□□□□ 0.99
CIRBP-216ENST00000588090 SH3BGRL2Q9UJC5 107 aa21.22■□□□□ 0.99
CIRBP-216ENST00000588090 ZNF232Q9UNY5 417 aa21.22■□□□□ 0.99
CIRBP-216ENST00000588090 AP3M1Q9Y2T2 418 aa21.22■□□□□ 0.99
CIRBP-216ENST00000588090 GCN1Q92616 2671 aaKnown RBP21.22■□□□□ 0.99
CIRBP-216ENST00000588090 C7orf72A4D263 438 aa21.21■□□□□ 0.99
CIRBP-216ENST00000588090 FIGNL2A6NMB9 653 aa21.21■□□□□ 0.99
CIRBP-216ENST00000588090 CYP7B1O75881 506 aa21.21■□□□□ 0.99
CIRBP-216ENST00000588090 TCEA1P23193 301 aaKnown RBP21.21■□□□□ 0.99
CIRBP-216ENST00000588090 PLPPR5Q32ZL2 321 aa21.21■□□□□ 0.99
CIRBP-216ENST00000588090 DOLPP1Q86YN1 238 aa21.21■□□□□ 0.99
CIRBP-216ENST00000588090 PM20D2Q8IYS1 436 aa21.21■□□□□ 0.99
CIRBP-216ENST00000588090 RELTQ969Z4 430 aa21.21■□□□□ 0.99
CIRBP-216ENST00000588090 SPATA5L1Q9BVQ7 753 aa21.21■□□□□ 0.99
CIRBP-216ENST00000588090 ARMC7Q9H6L4 198 aa21.21■□□□□ 0.99
CIRBP-216ENST00000588090 PNPLA3Q9NST1 481 aa21.21■□□□□ 0.99
CIRBP-216ENST00000588090 SLC5A6Q9Y289 635 aa21.21■□□□□ 0.99
CIRBP-216ENST00000588090 ZNF443Q9Y2A4 671 aaPredicted RBP21.21■□□□□ 0.99
CIRBP-216ENST00000588090 CLDN24A6NM45 220 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 EIF1P41567 113 aaKnown RBP21.2■□□□□ 0.98
CIRBP-216ENST00000588090 B3GALT5-AS1P59052 145 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 MRPL2Q5T653 305 aaKnown RBP21.2■□□□□ 0.98
CIRBP-216ENST00000588090 RNF220Q5VTB9 566 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 VRK2Q86Y07 508 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 OR5M9Q8NGP3 310 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 ZNF607Q96SK3 696 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 GPATCH1Q9BRR8 931 aaKnown RBP21.2■□□□□ 0.98
CIRBP-216ENST00000588090 PRDM14Q9GZV8 571 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 TAGLN3Q9UI15 199 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 MED12Q93074 2177 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 OR2M5A3KFT3 312 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 LRRTM2O43300 516 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 DNAJA2O60884 412 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 WDR1O75083 606 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 LINGO3P0C6S8 592 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 PABPC4LP0CB38 370 aaKnown RBP21.2■□□□□ 0.98
CIRBP-216ENST00000588090 PGCP20142 388 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 GZMMP51124 257 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 TMEM44Q2T9K0 475 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 EMC4Q5J8M3 183 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 ZNF311Q5JNZ3 666 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 ZNF836Q6ZNA1 936 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 CALHM3Q86XJ0 350 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 ZZZ3Q8IYH5 903 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 GTPBP8Q8N3Z3 284 aaPredicted RBP21.2■□□□□ 0.98
CIRBP-216ENST00000588090 FITM2Q8N6M3 262 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 GPR119Q8TDV5 335 aa21.2■□□□□ 0.98
CIRBP-216ENST00000588090 REXO5Q96IC2 774 aaKnown RBP21.2■□□□□ 0.98
CIRBP-216ENST00000588090 DNAJB12Q9NXW2 375 aaKnown RBP21.2■□□□□ 0.98
CIRBP-216ENST00000588090 GPC6Q9Y625 555 aaPredicted RBP21.2■□□□□ 0.98
CIRBP-216ENST00000588090 CDHR4A6H8M9 788 aa21.19■□□□□ 0.98
CIRBP-216ENST00000588090 CCL21O00585 134 aa21.19■□□□□ 0.98
CIRBP-216ENST00000588090 SERPINB7O75635 380 aa21.19■□□□□ 0.98
CIRBP-216ENST00000588090 GABRA1P14867 456 aa21.19■□□□□ 0.98
CIRBP-216ENST00000588090 PCGF2P35227 344 aa21.19■□□□□ 0.98
CIRBP-216ENST00000588090 SLC6A8P48029 635 aa21.19■□□□□ 0.98
CIRBP-216ENST00000588090 EEF1A1P68104 462 aaKnown RBP21.19■□□□□ 0.98
CIRBP-216ENST00000588090 VMACQ2NL98 169 aa21.19■□□□□ 0.98
CIRBP-216ENST00000588090 INTS11Q5TA45 600 aaKnown RBP21.19■□□□□ 0.98
CIRBP-216ENST00000588090 ERICH5Q6P6B1 374 aa21.19■□□□□ 0.98
CIRBP-216ENST00000588090 FJX1Q86VR8 437 aa21.19■□□□□ 0.98
CIRBP-216ENST00000588090 KLHDC3Q9BQ90 382 aa21.19■□□□□ 0.98
CIRBP-216ENST00000588090 STOML1Q9UBI4 398 aa21.19■□□□□ 0.98
CIRBP-216ENST00000588090 FLNCQ14315 2725 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 TENM4Q6N022 2769 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 E9PLN8 166 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 BCAS1O75363 584 aaPredicted RBP21.18■□□□□ 0.98
CIRBP-216ENST00000588090 HOXD4P09016 255 aaPredicted RBP21.18■□□□□ 0.98
CIRBP-216ENST00000588090 ESRRAP11474 423 aaPredicted RBP21.18■□□□□ 0.98
CIRBP-216ENST00000588090 CPN1P15169 458 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 ADH6P28332 368 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 PRKAR1BP31321 381 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 PTGER4P35408 488 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 PER3P56645 1201 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 PLAURQ03405 335 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 KRT72Q14CN4 511 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 SF3B4Q15427 424 aaKnown RBP eCLIP21.18■□□□□ 0.986e-14■■■■□ 20.8
CIRBP-216ENST00000588090 BCL2A1Q16548 175 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 DCST1Q5T197 706 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 C8orf82Q6P1X6 216 aaPredicted RBP21.18■□□□□ 0.98
CIRBP-216ENST00000588090 ZNF585AQ6P3V2 769 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 MTFR2Q6P444 385 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 GRAMD2AQ8IUY3 354 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 ZNF440Q8IYI8 595 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 FAM26EQ8N5C1 309 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 CNOT9Q92600 299 aaKnown RBP21.18■□□□□ 0.98
CIRBP-216ENST00000588090 VKORC1Q9BQB6 163 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 PIF1Q9H611 641 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 CAMK2AQ9UQM7 478 aa21.18■□□□□ 0.98
CIRBP-216ENST00000588090 MYO7BQ6PIF6 2116 aa21.17■□□□□ 0.98
CIRBP-216ENST00000588090 PRORSD1PA6NEY8 169 aa21.17■□□□□ 0.98
CIRBP-216ENST00000588090 PEPDP12955 493 aa21.17■□□□□ 0.98
CIRBP-216ENST00000588090 UQCRBP14927 111 aa21.17■□□□□ 0.98
CIRBP-216ENST00000588090 PRKCAP17252 672 aa21.17■□□□□ 0.98
CIRBP-216ENST00000588090 POU3F2P20265 443 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms