RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 DYRK3O43781 588 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 NME2P1O60361 137 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 PLOD3O60568 738 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 TOXO94900 526 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 PGM3O95394 542 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 GPR75O95800 540 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 ALPLP05186 524 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 HMGN2P05204 90 aaKnown RBP7.18□□□□□ -1.26
VMP1-204ENST00000587259 LYNP07948 512 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 TFPTP0C1Z6 253 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 NR2F1P10589 423 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 RHCEP18577 417 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 MAOAP21397 527 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 NME2P22392 152 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 MYF6P23409 242 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 GALNSP34059 522 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 XKP51811 444 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 GTF2A1P52655 376 aaPredicted RBP7.18□□□□□ -1.26
VMP1-204ENST00000587259 IST1P53990 364 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 SLC26A5P58743 744 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 KCNJ10P78508 379 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 PPP2R2BQ00005 443 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 TFF3Q07654 80 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 SERTAD2Q14140 314 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 ZNHIT3Q15649 155 aaPredicted RBP7.18□□□□□ -1.26
VMP1-204ENST00000587259 TUSC1Q2TAM9 212 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 NHSL2Q5HYW2 709 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 CDC73Q6P1J9 531 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 TNFAIP8L2Q6P589 184 aaPredicted RBP7.18□□□□□ -1.26
VMP1-204ENST00000587259 TMEM107Q6UX40 140 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 C16orf62Q7Z3J2 963 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 MDGA2Q7Z553 956 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 STK32CQ86UX6 486 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 RPS19BP1Q86WX3 136 aaKnown RBP7.18□□□□□ -1.26
VMP1-204ENST00000587259 CARM1Q86X55 608 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 SULF2Q8IWU5 870 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 CCDC116Q8IYX3 515 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 CA13Q8N1Q1 262 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 OR2L13Q8N349 312 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 LINC00471Q8N535 108 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 SLC5A8Q8N695 610 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 HORMAD2Q8N7B1 307 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 FAM86B1Q8N7N1 296 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 TMEM178AQ8NBL3 297 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 SETD9Q8NE22 299 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 PIK3C3Q8NEB9 887 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 NUP43Q8NFH3 380 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 M1APQ8TC57 530 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 SPPL2AQ8TCT8 520 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 ADAMTS15Q8TE58 950 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 SLC38A5Q8WUX1 472 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 OIT3Q8WWZ8 545 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 TFAP2CQ92754 450 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 MAL2Q969L2 176 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 TMEM19Q96HH6 336 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 CNBD2Q96M20 576 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 TRNT1Q96Q11 434 aaKnown RBP7.18□□□□□ -1.26
VMP1-204ENST00000587259 STACQ99469 402 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 TREX2Q9BQ50 279 aaPredicted RBP7.18□□□□□ -1.26
VMP1-204ENST00000587259 VKORC1Q9BQB6 163 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 YTHDF1Q9BYJ9 559 aaKnown RBP7.18□□□□□ -1.26
VMP1-204ENST00000587259 DEFB127Q9H1M4 99 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 OR51I1Q9H343 314 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 ARMC7Q9H6L4 198 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 ZNF696Q9H7X3 374 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 POLE3Q9NRF9 147 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 KLHL28Q9NXS3 571 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 C19orf25Q9UFG5 118 aaPredicted RBP7.18□□□□□ -1.26
VMP1-204ENST00000587259 SLC13A4Q9UKG4 626 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 BLOC1S6Q9UL45 172 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 SAMHD1Q9Y3Z3 626 aaKnown RBP7.18□□□□□ -1.26
VMP1-204ENST00000587259 ZNF469Q96JG9 3925 aaPredicted RBP7.18□□□□□ -1.26
VMP1-204ENST00000587259 GLOD5A6NK44 160 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 FAM166BA8MTA8 275 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 M0QX08 132 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 UPK1AO00322 258 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 SYT5O00445 386 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 TFECO14948 347 aaPredicted RBP7.17□□□□□ -1.26
VMP1-204ENST00000587259 PGRMC2O15173 223 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 CHST10O43529 356 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 PRKNO60260 465 aaPredicted RBP7.17□□□□□ -1.26
VMP1-204ENST00000587259 OR10H2O60403 315 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 UGT2B11O75310 529 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 MT-ND1P03886 318 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 GUSBP08236 651 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 SLC35E2P0CK97 266 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 CD99P14209 185 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 IGFBP2P18065 325 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 IGFBP5P24593 272 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 AQP1P29972 269 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 PTGS2P35354 604 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 FEN1P39748 380 aaKnown RBP7.17□□□□□ -1.26
VMP1-204ENST00000587259 MC3RP41968 323 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 TPD52P55327 224 aaPredicted RBP7.17□□□□□ -1.26
VMP1-204ENST00000587259 HSD17B7P56937 341 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 NUP107P57740 925 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 PMPCAQ10713 525 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 STX4Q12846 297 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 RUNX2Q13950 521 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 LASP1Q14847 261 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms