RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 FAM71CQ8NEG0 241 aa12.4□□□□□ -0.42
VMP1-203ENST00000586245 OR5W2Q8NH69 310 aa12.4□□□□□ -0.42
VMP1-203ENST00000586245 TPD52L3Q96J77 140 aa12.4□□□□□ -0.42
VMP1-203ENST00000586245 LRGUKQ96M69 825 aa12.4□□□□□ -0.42
VMP1-203ENST00000586245 TAAR6Q96RI8 345 aa12.4□□□□□ -0.42
VMP1-203ENST00000586245 TRIM15Q9C019 465 aa12.4□□□□□ -0.42
VMP1-203ENST00000586245 ZNF703Q9H7S9 590 aaPredicted RBP12.4□□□□□ -0.42
VMP1-203ENST00000586245 QPCTLQ9NXS2 382 aa12.4□□□□□ -0.42
VMP1-203ENST00000586245 ICAM5Q9UMF0 924 aa12.4□□□□□ -0.42
VMP1-203ENST00000586245 SAMD4AQ9UPU9 718 aaKnown RBP12.4□□□□□ -0.42
VMP1-203ENST00000586245 HRH3Q9Y5N1 445 aa12.4□□□□□ -0.42
VMP1-203ENST00000586245 CFAP73A6NFT4 308 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 TTLL8A6PVC2 850 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 CDC40O60508 579 aaKnown RBP eCLIP12.39□□□□□ -0.43
VMP1-203ENST00000586245 BCAS1O75363 584 aaPredicted RBP12.39□□□□□ -0.43
VMP1-203ENST00000586245 TRAPPC6AO75865 159 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 LGI1O95970 557 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 FESP07332 822 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 LINGO3P0C6S8 592 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 PGCP20142 388 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 DPP4P27487 766 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 SRD5A2P31213 254 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 RYKP34925 604 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 MAGEA5P43359 124 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 CRYBA2P53672 197 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 TRAP1Q12931 704 aaKnown RBP12.39□□□□□ -0.43
VMP1-203ENST00000586245 SLC10A1Q14973 349 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 GLIPR1L2Q4G1C9 344 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 MTX3Q5HYI7 312 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 CYP2R1Q6VVX0 501 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 CBLL1Q75N03 491 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 GPR32P1Q8NGA4 272 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 SLC35B4Q969S0 331 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 ARSGQ96EG1 525 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 C1GALT1C1Q96EU7 318 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 AGPAT4Q9NRZ5 378 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 DCAF13Q9NV06 445 aaKnown RBP12.39□□□□□ -0.43
VMP1-203ENST00000586245 SLC9A8Q9Y2E8 581 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 CHST2Q9Y4C5 530 aa12.39□□□□□ -0.43
VMP1-203ENST00000586245 EML6Q6ZMW3 1958 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 A0A087WZY1 265 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 FRS3O43559 492 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 CIB2O75838 187 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 GKN3PP0CG01 181 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 HK1P19367 917 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 GCKP35557 465 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 RGS8P57771 180 aaPredicted RBP12.38□□□□□ -0.43
VMP1-203ENST00000586245 MS4A2Q01362 244 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 PLAURQ03405 335 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 EPS8Q12929 822 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 RNFT1Q5M7Z0 435 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 LCN8Q6JVE9 175 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 FKBP9P1Q75LS8 142 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 SPPL2CQ8IUH8 684 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 FAM83FQ8NEG4 500 aaPredicted RBP12.38□□□□□ -0.43
VMP1-203ENST00000586245 OR52E4Q8NGH9 312 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 OR14L1PQ8NHC6 308 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 ZNF563Q8TA94 476 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 VANGL1Q8TAA9 524 aaPredicted RBP12.38□□□□□ -0.43
VMP1-203ENST00000586245 GPR119Q8TDV5 335 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 SNRNP40Q96DI7 357 aaKnown RBP12.38□□□□□ -0.43
VMP1-203ENST00000586245 ARHGDIGQ99819 225 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 RSPO3Q9BXY4 272 aaPredicted RBP12.38□□□□□ -0.43
VMP1-203ENST00000586245 DEFB127Q9H1M4 99 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 UBQLN3Q9H347 655 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 OLAHQ9NV23 265 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 MED17Q9NVC6 651 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 TAS2R10Q9NYW0 307 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 PRDM4Q9UKN5 801 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 VDAC3Q9Y277 283 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 SH3GLB1Q9Y371 365 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 MRPS18CQ9Y3D5 142 aaKnown RBP12.38□□□□□ -0.43
VMP1-203ENST00000586245 NINQ8N4C6 2090 aa12.38□□□□□ -0.43
VMP1-203ENST00000586245 EIF4E1BA6NMX2 242 aaKnown RBP12.37□□□□□ -0.43
VMP1-203ENST00000586245 B4DXG7 233 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 NPIPA5E9PKD4 350 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 M0R3H8 397 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 AP3D1O14617 1153 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 ACOT8O14734 319 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 EPPINO95925 133 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 HPNP05981 417 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 ATP6V1B2P21281 511 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 IDH2P48735 452 aaKnown RBP12.37□□□□□ -0.43
VMP1-203ENST00000586245 COPZ1P61923 177 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 FLOT2Q14254 428 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 QPRTQ15274 297 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 NRF1Q16656 503 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 IFI44LQ53G44 452 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 ARSKQ6UWY0 536 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 COMTD1Q86VU5 262 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 RANBP3LQ86VV4 465 aaPredicted RBP12.37□□□□□ -0.43
VMP1-203ENST00000586245 CARM1Q86X55 608 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 OR10Q1Q8NGQ4 319 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 FAR1Q8WVX9 515 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 GEMIN6Q8WXD5 167 aaKnown RBP12.37□□□□□ -0.43
VMP1-203ENST00000586245 TMEM234Q8WY98 164 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 NR4A3Q92570 626 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 POP5Q969H6 163 aaKnown RBP12.37□□□□□ -0.43
VMP1-203ENST00000586245 ZBTB8AQ96BR9 441 aa12.37□□□□□ -0.43
VMP1-203ENST00000586245 HSH2DQ96JZ2 352 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms