RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ZNF227Q86WZ6 799 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 EPHX4Q8IUS5 362 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 PARP8Q8N3A8 854 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 PIK3R3Q92569 461 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 DTNBP1Q96EV8 351 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 MPP4Q96JB8 637 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 NR1H4Q96RI1 486 aaPredicted RBP11.59□□□□□ -0.55
VMP1-202ENST00000585847 LMF1Q96S06 567 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 ZNF559Q9BR84 538 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 TACO1Q9BSH4 297 aaKnown RBP11.59□□□□□ -0.55
VMP1-202ENST00000585847 AMBRA1Q9C0C7 1298 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 NXF5Q9H1B4 397 aaKnown RBP11.59□□□□□ -0.55
VMP1-202ENST00000585847 COQ10BQ9H8M1 238 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 ZNF556Q9HAH1 456 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 KIF17Q9P2E2 1029 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 MYOTQ9UBF9 498 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 MKLN1Q9UL63 735 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 LYVE1Q9Y5Y7 322 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 KCNE3Q9Y6H6 103 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 SERINC4A6NH21 518 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 SAC3D1A6NKF1 404 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 ALG1L2C9J202 215 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 WWP2O00308 870 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 EI24O14681 340 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 EIF4E2O60573 245 aaKnown RBP11.58□□□□□ -0.56
VMP1-202ENST00000585847 FAM87AP0C7U9 286 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 SFTPCP11686 197 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 CD97P48960 835 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 SUMO3P55854 103 aaPredicted RBP11.58□□□□□ -0.56
VMP1-202ENST00000585847 COX10Q12887 443 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 MFAP5Q13361 173 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 TRAM2Q15035 370 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 LRRC36Q1X8D7 754 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 MICAQ29983 383 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 ACER2Q5QJU3 275 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 FAHD1Q6P587 224 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 TMEM81Q6P7N7 255 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 ZNF836Q6ZNA1 936 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 GALNT10Q86SR1 603 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 GPALPP1Q8IXQ4 340 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 BEST3Q8N1M1 668 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 SLC43A2Q8N370 569 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 LSMEM1Q8N8F7 131 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 FAM71CQ8NEG0 241 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 OR4N2Q8NGD1 307 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 OR4C15Q8NGM1 316 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 GIPC3Q8TF64 312 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 SLC38A4Q969I6 547 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 TMCO6Q96DC7 493 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 ABHD17AQ96GS6 310 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 GAL3ST4Q96RP7 486 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 RASL10BQ96S79 203 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 FNDC11Q9BVV2 318 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 ANKRD60Q9BZ19 345 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 MGAT4BQ9UQ53 548 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 POFUT2Q9Y2G5 429 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 PCDHGB6Q9Y5F9 930 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 CSAG2Q9Y5P2 127 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 SPTA1P02549 2419 aa11.58□□□□□ -0.56
VMP1-202ENST00000585847 CNTRLQ7Z7A1 2325 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 GXYLT2A0PJZ3 443 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 TRAPPC13A5PLN9 417 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 ITGA10O75578 1167 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 PPM1BO75688 479 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 OR2J2O76002 312 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 CCNB2O95067 398 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 WDPCPO95876 746 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 IGF2P01344 180 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 MT-ND1P03886 318 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 GSTM3P21266 225 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 IGFBP5P24593 272 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 RBM34P42696 430 aaKnown RBP11.57□□□□□ -0.56
VMP1-202ENST00000585847 NR0B1P51843 470 aaKnown RBP11.57□□□□□ -0.56
VMP1-202ENST00000585847 AQP4P55087 323 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 CDH12P55289 794 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 TAS2R41P59536 307 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 COPZ1P61923 177 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 KCNAB2Q13303 367 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 NNATQ16517 81 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 MEP1AQ16819 746 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 KLHL26Q53HC5 615 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 DCST1Q5T197 706 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 MRPL2Q5T653 305 aaKnown RBP11.57□□□□□ -0.56
VMP1-202ENST00000585847 AGAP7PQ5VUJ5 663 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 DESI1Q6ICB0 168 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 FIGNL1Q6PIW4 674 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 ISLR2Q6UXK2 745 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 DEF8Q6ZN54 512 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 LINC00696Q6ZRV3 163 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 NUP54Q7Z3B4 507 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 RNF113BQ8IZP6 322 aaKnown RBP11.57□□□□□ -0.56
VMP1-202ENST00000585847 SLC5A8Q8N695 610 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 HS6ST2Q96MM7 605 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 AGAP4Q96P64 663 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 ALPK1Q96QP1 1244 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 ADI1Q9BV57 179 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 NMNAT1Q9HAN9 279 aaPredicted RBP11.57□□□□□ -0.56
VMP1-202ENST00000585847 C12orf10Q9HB07 376 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 TMEM27Q9HBJ8 222 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 PLA2G3Q9NZ20 509 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms