RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.81□□□□□ -0.52
TRIM47-202ENST00000585333 TIGD3Q6B0B8 471 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 SPINK14Q6IE38 97 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 ENPP6Q6UWR7 440 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 C5orf46Q6UWT4 87 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 PLEKHM3Q6ZWE6 761 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 VTCN1Q7Z7D3 282 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 SLC22A16Q86VW1 577 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 GPR32P1Q8NGA4 272 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 DUSP19Q8WTR2 217 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 ZBTB8AQ96BR9 441 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 SDCCAG3Q96C92 435 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 SCMH1Q96GD3 660 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 MPP4Q96JB8 637 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 ZNF300Q96RE9 604 aaPredicted RBP11.81□□□□□ -0.52
TRIM47-202ENST00000585333 MCHR1Q99705 422 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 PIP5K1AQ99755 562 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 CHID1Q9BWS9 393 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 OSBPL10Q9BXB5 764 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 ZFP64Q9NPA5 681 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 ANKRD10Q9NXR5 420 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 C6orf203Q9P0P8 240 aaPredicted RBP11.81□□□□□ -0.52
TRIM47-202ENST00000585333 CARD8Q9Y2G2 431 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 MRPS18CQ9Y3D5 142 aaKnown RBP11.81□□□□□ -0.52
TRIM47-202ENST00000585333 V9GYQ6 96 aa11.81□□□□□ -0.52
TRIM47-202ENST00000585333 KMT2BQ9UMN6 2715 aaPredicted RBP11.8□□□□□ -0.52
TRIM47-202ENST00000585333 EXPH5Q8NEV8 1989 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 DOCK10Q96BY6 2186 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 TRAPPC13A5PLN9 417 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 PEX1O43933 1283 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 TPST1O60507 370 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 ENTPD5O75356 428 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 TRIM3O75382 744 aaPredicted RBP11.8□□□□□ -0.52
TRIM47-202ENST00000585333 LDLRP01130 860 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 SEMG1P04279 462 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 GP1BBP13224 206 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 PLGLB1Q02325 96 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 ZNF117Q03924 483 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 ZNF169Q14929 603 aaPredicted RBP11.8□□□□□ -0.52
TRIM47-202ENST00000585333 CD226Q15762 336 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 COL28A1Q2UY09 1125 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 ZNF468Q5VIY5 522 aaPredicted RBP11.8□□□□□ -0.52
TRIM47-202ENST00000585333 PRAMEF20Q5VT98 475 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 RPUSD3Q6P087 351 aaKnown RBP11.8□□□□□ -0.52
TRIM47-202ENST00000585333 ULK3Q6PHR2 472 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 DEF8Q6ZN54 512 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 OLIG3Q7RTU3 272 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 MDGA2Q7Z553 956 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 CLIP4Q8N3C7 705 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 GATSQ8NAP1 163 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 OR2M7Q8NG81 312 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 VANGL1Q8TAA9 524 aaPredicted RBP11.8□□□□□ -0.52
TRIM47-202ENST00000585333 CNOT9Q92600 299 aaKnown RBP11.8□□□□□ -0.52
TRIM47-202ENST00000585333 EXTL1Q92935 676 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 WBP1Q96G27 269 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 MRGPRX4Q96LA9 322 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 HS6ST2Q96MM7 605 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 FNDC11Q9BVV2 318 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 PRORYQ9H606 182 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 REEP1Q9H902 201 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 S100A14Q9HCY8 104 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 SERINC1Q9NRX5 453 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 RLIMQ9NVW2 624 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 TAS2R10Q9NYW0 307 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 PLA2G3Q9NZ20 509 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 DNAJB9Q9UBS3 223 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 DKKL1Q9UK85 242 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 ZMIZ1Q9ULJ6 1067 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 ICAM5Q9UMF0 924 aa11.8□□□□□ -0.52
TRIM47-202ENST00000585333 CENPVL1A0A0U1RR11 272 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 C7orf72A4D263 438 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 M0R3H8 397 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 CST1P01037 141 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 ZNF17P17021 662 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 SRD5A2P31213 254 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 IFNGR2P38484 337 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 PTGDSP41222 190 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 APOBEC1P41238 236 aaKnown RBP11.79□□□□□ -0.52
TRIM47-202ENST00000585333 SLC1A3P43003 542 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 TRAM2Q15035 370 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 HYAL4Q2M3T9 481 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 COLEC12Q5KU26 742 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 OR2T5Q6IEZ7 315 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 APOOLQ6UXV4 268 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 Q6ZS92 163 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 ASB18Q6ZVZ8 466 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 RRM2BQ7LG56 351 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 GRINAQ7Z429 371 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 OFCC1Q8IZS5 231 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 FADS6Q8N9I5 356 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 ZFP62Q8NB50 900 aaPredicted RBP11.79□□□□□ -0.52
TRIM47-202ENST00000585333 OR6T1Q8NGN1 323 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 OR2T29Q8NH02 315 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 PHF10Q8WUB8 498 aaKnown RBP11.79□□□□□ -0.52
TRIM47-202ENST00000585333 NTNG2Q96CW9 530 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 ABHD17AQ96GS6 310 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 SH3YL1Q96HL8 342 aaPredicted RBP11.79□□□□□ -0.52
TRIM47-202ENST00000585333 C7orf34Q96L11 122 aa11.79□□□□□ -0.52
TRIM47-202ENST00000585333 JSRP1Q96MG2 331 aaPredicted RBP11.79□□□□□ -0.52
TRIM47-202ENST00000585333 SIGLEC12Q96PQ1 595 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms