RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 FANCFQ9NPI8 374 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 AIG1Q9NVV5 245 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 BTNL2Q9UIR0 455 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 PROCRQ9UNN8 238 aa11.13□□□□□ -0.63
SS18-225ENST00000585121 GPC6Q9Y625 555 aaPredicted RBP11.13□□□□□ -0.63
SS18-225ENST00000585121 NUP214P35658 2090 aaPredicted RBP11.12□□□□□ -0.63
SS18-225ENST00000585121 GOLGA8QA0A0J9YX86 632 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 GOLGA8OA6NCC3 632 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 SERINC4A6NH21 518 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 GOLGA8NF8WBI6 632 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 TNFSF11O14788 317 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 ADAMDEC1O15204 470 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 ZNF264O43296 627 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 CXCL13O43927 109 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 SCN2BO60939 215 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 OPN1LWP04000 364 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 LINGO3P0C6S8 592 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 PABPC4LP0CB38 370 aaKnown RBP11.12□□□□□ -0.63
SS18-225ENST00000585121 OR12D1P0DN82 309 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 UBL4AP11441 157 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 IDO1P14902 403 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 KIR2DL2P43627 348 aaPredicted RBP11.12□□□□□ -0.63
SS18-225ENST00000585121 RNF144AP50876 292 aaPredicted RBP11.12□□□□□ -0.63
SS18-225ENST00000585121 CCR4P51679 360 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 CARD18P57730 90 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 UFM1P61960 85 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 TXNL4AP83876 142 aaKnown RBP11.12□□□□□ -0.63
SS18-225ENST00000585121 HPCAP84074 193 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 PDZK1Q5T2W1 519 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 SAXO2Q658L1 398 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 TNFAIP8L2Q6P589 184 aaPredicted RBP11.12□□□□□ -0.63
SS18-225ENST00000585121 VWA1Q6PCB0 445 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 FAM214BQ7L5A3 538 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 BTLAQ7Z6A9 289 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 LILRA2Q8N149 483 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 OR5W2Q8NH69 310 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 FBXO27Q8NI29 283 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 OIT3Q8WWZ8 545 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 NEURL3Q96EH8 262 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 KLHL15Q96M94 604 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 CCDC115Q96NT0 180 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 OR52E6Q96RD3 313 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 SLC35A5Q9BS91 424 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 TMEM185BQ9H7F4 350 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 POLE3Q9NRF9 147 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 GLRX2Q9NS18 164 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 ELOVL5Q9NYP7 299 aa11.12□□□□□ -0.63
SS18-225ENST00000585121 KIAA1549Q9HCM3 1950 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 FAM221AA4D161 298 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 SH3D21A4FU49 640 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 NPIPB9F8W1W9 429 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 ZNF195O14628 629 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 RRP9O43818 475 aaKnown RBP11.11□□□□□ -0.63
SS18-225ENST00000585121 CYP7B1O75881 506 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 CSTAP01040 98 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 PGRP06401 933 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 ALDOCP09972 364 aaKnown RBP11.11□□□□□ -0.63
SS18-225ENST00000585121 CD8BP10966 210 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 POU2F1P14859 743 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 PSMA4P25789 261 aaKnown RBP11.11□□□□□ -0.63
SS18-225ENST00000585121 CD79BP40259 229 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 PCYT1AP49585 367 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 CASP9P55211 416 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 PHC1P78364 1004 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 FOXF1Q12946 379 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 ZNF141Q15928 474 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.11□□□□□ -0.63
SS18-225ENST00000585121 CBLN3Q6UW01 205 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 ZNF621Q6ZSS3 439 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 EIF3MQ7L2H7 374 aaKnown RBP11.11□□□□□ -0.63
SS18-225ENST00000585121 ARFGAP2Q8N6H7 521 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 POC1BQ8TC44 478 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 PIWIL2Q8TC59 973 aaKnown RBP11.11□□□□□ -0.63
SS18-225ENST00000585121 GPR119Q8TDV5 335 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 ZNF75CPQ92670 426 aaPredicted RBP11.11□□□□□ -0.63
SS18-225ENST00000585121 OSTF1Q92882 214 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 GMPPAQ96IJ6 420 aaPredicted RBP11.11□□□□□ -0.63
SS18-225ENST00000585121 ADGRG7Q96K78 797 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 MRGPRX4Q96LA9 322 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 PANX1Q96RD7 426 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 ZNF350Q9GZX5 532 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 LAT2Q9GZY6 243 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 OPN3Q9H1Y3 402 aaPredicted RBP11.11□□□□□ -0.63
SS18-225ENST00000585121 SERHL2Q9H4I8 314 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 MKLN1Q9UL63 735 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 ICAM5Q9UMF0 924 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 WDR45Q9Y484 360 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 GPR45Q9Y5Y3 372 aa11.11□□□□□ -0.63
SS18-225ENST00000585121 A0A0J9YW62 118 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 CCDC154A6NI56 674 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 KLF11O14901 512 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 OIP5O43482 229 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 FCMRO60667 390 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 SLC22A3O75751 556 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 AQP8O94778 261 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 IL6P05231 212 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 GUSBP08236 651 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 CD1EP15812 388 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 PGCP20142 388 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 DNASE1P24855 282 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms