RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	NINJ1	Q92982	152 aa		11.97	□□□□□ -0.49
SREBF1-223	ENST00000584760	INTS12	Q96CB8	462 aa	Known RBP	11.97	□□□□□ -0.49
SREBF1-223	ENST00000584760	ZNF845	Q96IR2	970 aa	Predicted RBP	11.97	□□□□□ -0.49
SREBF1-223	ENST00000584760	RNF145	Q96MT1	663 aa		11.97	□□□□□ -0.49
SREBF1-223	ENST00000584760	PANX1	Q96RD7	426 aa		11.97	□□□□□ -0.49
SREBF1-223	ENST00000584760	PINK1	Q9BXM7	581 aa		11.97	□□□□□ -0.49
SREBF1-223	ENST00000584760	POLDIP3	Q9BY77	421 aa	Known RBP	11.97	□□□□□ -0.49
SREBF1-223	ENST00000584760	SLC24A3	Q9HC58	644 aa		11.97	□□□□□ -0.49
SREBF1-223	ENST00000584760	EXD2	Q9NVH0	621 aa		11.97	□□□□□ -0.49
SREBF1-223	ENST00000584760	ZIM2	Q9NZV7	527 aa		11.97	□□□□□ -0.49
SREBF1-223	ENST00000584760	ST6GALNAC2	Q9UJ37	374 aa		11.97	□□□□□ -0.49
SREBF1-223	ENST00000584760	CARD8	Q9Y2G2	431 aa		11.97	□□□□□ -0.49
SREBF1-223	ENST00000584760	ZNF175	Q9Y473	711 aa		11.97	□□□□□ -0.49
SREBF1-223	ENST00000584760	MPDZ	O75970	2070 aa		11.97	□□□□□ -0.49
SREBF1-223	ENST00000584760		A0A1W2PNV4	684 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	PRAMEF27	A3QJZ7	478 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	CTAG2	O75638	210 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	SLC22A3	O75751	556 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	UGT2B17	O75795	530 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	SASH3	O75995	380 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	IL6	P05231	212 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	OR12D1	P0DN82	309 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	CHI3L1	P36222	383 aa	Predicted RBP	11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	P2RX1	P51575	399 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	FOXF1	Q12946	379 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	SKP2	Q13309	424 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	GPR68	Q15743	365 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	CTU2	Q2VPK5	515 aa	Known RBP	11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	AP1AR	Q63HQ0	302 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	TYW3	Q6IPR3	259 aa	Known RBP	11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	FRRS1	Q6ZNA5	592 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	CHMP1B	Q7LBR1	199 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	P4HA3	Q7Z4N8	544 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	RNF130	Q86XS8	419 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	ZZZ3	Q8IYH5	903 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	TRIML2	Q8N7C3	387 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	GOLGA6L1	Q8N7Z2	621 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	OR9I1	Q8NGQ6	314 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	FNDC9	Q8TBE3	224 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	ZNF524	Q96C55	264 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	ROPN1L	Q96C74	230 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	ADGRG7	Q96K78	797 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	RNF122	Q9H9V4	155 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	MKLN1	Q9UL63	735 aa		11.96	□□□□□ -0.49
SREBF1-223	ENST00000584760	SERINC4	A6NH21	518 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	HMGN4	O00479	90 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	ADAMDEC1	O15204	470 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	UBD	O15205	165 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	ZNF264	O43296	627 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	TGDS	O95455	350 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	NTN1	O95631	604 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	CRH	P06850	196 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	UBL4A	P11441	157 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	IL11	P20809	199 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	DNASE1	P24855	282 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	ELK4	P28324	431 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	PEX19	P40855	299 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	EIF1	P41567	113 aa	Known RBP	11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	MRPL19	P49406	292 aa	Known RBP	11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	RPS3A	P61247	264 aa	Known RBP	11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	RAC1	P63000	192 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	SORD	Q00796	357 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	SNTB1	Q13884	538 aa	Known RBP	11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	PON3	Q15166	354 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	GUSBP1	Q15486	140 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	TOMM34	Q15785	309 aa	Predicted RBP	11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	MAPK14	Q16539	360 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	ATAD3B	Q5T9A4	648 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	OR2A2	Q6IF42	318 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760		Q71RC1	249 aa	Predicted RBP	11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	FAM71C	Q8NEG0	241 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	TOR1AIP2	Q8NFQ8	470 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	OR10D3	Q8NH80	312 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	GPR119	Q8TDV5	335 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	XAGE5	Q8WWM1	108 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	OIT3	Q8WWZ8	545 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	ARSG	Q96EG1	525 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	LRRC46	Q96FV0	321 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	EBF4	Q9BQW3	602 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	SAP130	Q9H0E3	1048 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	TMEM185B	Q9H7F4	350 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	TCF7L2	Q9NQB0	619 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	DLL4	Q9NR61	685 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	POLE3	Q9NRF9	147 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	SLC6A13	Q9NSD5	602 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	STOML1	Q9UBI4	398 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	PACSIN3	Q9UKS6	424 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	PLEKHA6	Q9Y2H5	1048 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	WDR45	Q9Y484	360 aa		11.95	□□□□□ -0.5
SREBF1-223	ENST00000584760	GTPBP1	O00178	669 aa	Known RBP	11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	ETV2	O00321	342 aa	Predicted RBP	11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	RFXANK	O14593	260 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	EIF1AY	O14602	144 aa	Known RBP	11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	POLR3G	O15318	223 aa	Predicted RBP	11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	EIF4E2	O60573	245 aa	Known RBP	11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	DNAJA2	O60884	412 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	AQP8	O94778	261 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	NUDT14	O95848	222 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms