RNA–Protein interactions for RNA: ENST00000584527.1

SPECC1-223, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, human

TSL 3 BASIC

Gene SPECC1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPECC1-223	ENST00000584527	CLIC1	O00299	241 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	HMGN4	O00479	90 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	SCD	O00767	359 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	GNB5	O14775	395 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	SCO2	O43819	266 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	CPN1	P15169	458 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	MVD	P53602	400 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	ATP12A	P54707	1039 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	C17orf67	Q0P5P2	114 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	FADD	Q13158	208 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	GTDC1	Q4AE62	458 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	COQ5	Q5HYK3	327 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	COX20	Q5RI15	118 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	DCST1	Q5T197	706 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	ZAR1	Q86SH2	424 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	ADGRE4P	Q86SQ3	457 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	GALNT10	Q86SR1	603 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	WDSUB1	Q8N9V3	476 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	PNPT1	Q8TCS8	783 aa	Known RBP	13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	PMM1	Q92871	262 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	RAB8B	Q92930	207 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	ABTB1	Q969K4	478 aa	Predicted RBP	13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	ROPN1L	Q96C74	230 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	TRNT1	Q96Q11	434 aa	Known RBP	13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	UCN2	Q96RP3	112 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	ZNF350	Q9GZX5	532 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	PPP4R1L	Q9P1A2	415 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	CAMK2A	Q9UQM7	478 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	SLC6A5	Q9Y345	797 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	ACAN	P16112	2415 aa		13.7	□□□□□ -0.22
SPECC1-223	ENST00000584527	NIPBL	Q6KC79	2804 aa	eCLIP	13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	FREM3	P0C091	2139 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	IGLV3-32	A0A0A0MS00	114 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	TRBV5-3	A0A0A0MS03	114 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	C2orf72	A6NCS6	295 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	NPIPB9	F8W1W9	429 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527		H3BNH8	94 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	NDUFB5	O43674	189 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	ATE1	O95260	518 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	ANGPTL1	O95841	491 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	C1QC	P02747	245 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	GCK	P35557	465 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	CRAT	P43155	626 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	DSTN	P60981	165 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	ADAM8	P78325	824 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	HPCA	P84074	193 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	STX5	Q13190	355 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	DEFB113	Q30KQ7	82 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	KLHL26	Q53HC5	615 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	EIPR1	Q53HC9	387 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	WIPI1	Q5MNZ9	446 aa	Predicted RBP	13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	DLEU7	Q6UYE1	221 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	MTERF4	Q7Z6M4	381 aa	Known RBP	13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	PIGW	Q7Z7B1	504 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	DHDDS	Q86SQ9	333 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	MARCH3	Q86UD3	253 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	MSRB3	Q8IXL7	192 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	FAM83F	Q8NEG4	500 aa	Predicted RBP	13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	OR4K17	Q8NGC6	315 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	AURKB	Q96GD4	344 aa	Predicted RBP	13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	TRIB1	Q96RU8	372 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	SFXN3	Q9BWM7	321 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	SAP130	Q9H0E3	1048 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	PLEKHF2	Q9H8W4	249 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	SLC25A37	Q9NYZ2	338 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	VAPA	Q9P0L0	249 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	P2RX2	Q9UBL9	471 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	WDR45	Q9Y484	360 aa		13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	FLNA	P21333	2647 aa	Known RBP	13.69	□□□□□ -0.22
SPECC1-223	ENST00000584527	ABCA2	Q9BZC7	2435 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	TMEM247	A6NEH6	219 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	EVPLL	A8MZ36	301 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	KIAA0513	O60268	411 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	FCMR	O60667	390 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	NPPA	P01160	153 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	NR2F1	P10589	423 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	BMP2	P12643	396 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	ETFA	P13804	333 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	NFYC	Q13952	458 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	CYLC2	Q14093	348 aa	Predicted RBP	13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	GNA13	Q14344	377 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	GANAB	Q14697	944 aa	Known RBP	13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	RGN	Q15493	299 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	ZNF141	Q15928	474 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	MMEL1	Q495T6	779 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	GPAT3	Q53EU6	434 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	APOOL	Q6UXV4	268 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	MTDH	Q86UE4	582 aa	Known RBP	13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	RETREG3	Q86VR2	466 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	FADS6	Q8N9I5	356 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	DUSP19	Q8WTR2	217 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	DOCK7	Q96N67	2140 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	CGREF1	Q99674	301 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	RTN4R	Q9BZR6	473 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	OR2B2	Q9GZK3	357 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	CALML5	Q9NZT1	146 aa		13.68	□□□□□ -0.22
SPECC1-223	ENST00000584527	SLAMF8	Q9P0V8	285 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms