RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 IL6P05231 212 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 GSNP06396 782 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 PSMA4P25789 261 aaKnown RBP18.36■□□□□ 0.53
SS18-224ENST00000584083 CDKN2CP42773 168 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 CCR4P51679 360 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 SIRPAP78324 504 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 FOXF1Q12946 379 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 ZNF141Q15928 474 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 GPAT3Q53EU6 434 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 RNF130Q86XS8 419 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 LURAP1LQ8IV03 231 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 ANKHD1Q8IWZ3 2542 aaKnown RBP18.36■□□□□ 0.53
SS18-224ENST00000584083 LILRA2Q8N149 483 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 TOR1AIP2Q8NFQ8 470 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 FAM222BQ8WU58 562 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 C7orf26Q96N11 449 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 ZNF350Q9GZX5 532 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 WDR45Q9Y484 360 aa18.36■□□□□ 0.53
SS18-224ENST00000584083 POLQO75417 2590 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 RFXANKO14593 260 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 TNFSF11O14788 317 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 EIF4E2O60573 245 aaKnown RBP18.35■□□□□ 0.53
SS18-224ENST00000584083 C1QCP02747 245 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 FCGR2AP12318 317 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 ANXA11P50995 505 aaKnown RBP18.35■□□□□ 0.53
SS18-224ENST00000584083 HPCAP84074 193 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 EPGNQ6UW88 154 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 ESPNLQ6ZVH7 1005 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 OR5W2Q8NH69 310 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 OR10D3Q8NH80 312 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 FBXO27Q8NI29 283 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 GPR119Q8TDV5 335 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 RNF122Q9H9V4 155 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 SLCO1B3Q9NPD5 702 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 SDR39U1Q9NRG7 319 aaPredicted RBP18.35■□□□□ 0.53
SS18-224ENST00000584083 PAQR5Q9NXK6 330 aaPredicted RBP18.35■□□□□ 0.53
SS18-224ENST00000584083 GALNT8Q9NY28 637 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 ZIM2Q9NZV7 527 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 KCNE5Q9UJ90 142 aa18.35■□□□□ 0.53
SS18-224ENST00000584083 GPC6Q9Y625 555 aaPredicted RBP18.35■□□□□ 0.53
SS18-224ENST00000584083 A8MXE2 369 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 HMGB1P1B2RPK0 211 aaPredicted RBP18.34■□□□□ 0.53
SS18-224ENST00000584083 MSTNO14793 375 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 CXCL13O43927 109 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 UGT2B17O75795 530 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 AQP8O94778 261 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 SYNGR4O95473 234 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 CSTAP01040 98 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 H2AFXP16104 143 aaPredicted RBP18.34■□□□□ 0.53
SS18-224ENST00000584083 IL11P20809 199 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 SFTPDP35247 375 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 CPOXP36551 454 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 SORDQ00796 357 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 CBFBQ13951 182 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 TOMM34Q15785 309 aaPredicted RBP18.34■□□□□ 0.53
SS18-224ENST00000584083 PDSS1Q5T2R2 415 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 HBMQ6B0K9 141 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 TYW3Q6IPR3 259 aaKnown RBP18.34■□□□□ 0.53
SS18-224ENST00000584083 VWA1Q6PCB0 445 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 BTLAQ7Z6A9 289 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 MIER2Q8N344 545 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 ATP6V1C2Q8NEY4 427 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 OR2V1Q8NHB1 315 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 PNPT1Q8TCS8 783 aaKnown RBP18.34■□□□□ 0.53
SS18-224ENST00000584083 STARD4Q96DR4 205 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 VIPAS39Q9H9C1 493 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 POLE3Q9NRF9 147 aa18.34■□□□□ 0.53
SS18-224ENST00000584083 MCTS1Q9ULC4 181 aaKnown RBP18.34■□□□□ 0.53
SS18-224ENST00000584083 ANKRD17O75179 2603 aaKnown RBP18.34■□□□□ 0.53
SS18-224ENST00000584083 UQCRHLA0A096LP55 91 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 A0A0J9YW62 118 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 CENPVL1A0A0U1RR11 272 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 ADAMDEC1O15204 470 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 KIAA0513O60268 411 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 ANP32DO95626 131 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 PLGP00747 810 aaPredicted RBP18.33■□□□□ 0.52
SS18-224ENST00000584083 PRKCAP17252 672 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 ELK4P28324 431 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 ADH6P28332 368 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 KIR2DL2P43627 348 aaPredicted RBP18.33■□□□□ 0.52
SS18-224ENST00000584083 SLC6A8P48029 635 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 POLR2JP52435 117 aaKnown RBP18.33■□□□□ 0.52
SS18-224ENST00000584083 QPRTQ15274 297 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 CTU2Q2VPK5 515 aaKnown RBP18.33■□□□□ 0.52
SS18-224ENST00000584083 DNAJC14Q6Y2X3 702 aaPredicted RBP18.33■□□□□ 0.52
SS18-224ENST00000584083 EIF3MQ7L2H7 374 aaKnown RBP18.33■□□□□ 0.52
SS18-224ENST00000584083 CDH24Q86UP0 819 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 ZNF619Q8N2I2 560 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 LINC01560Q8TB33 94 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 ARSGQ96EG1 525 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 ADGRG7Q96K78 797 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 KLHL15Q96M94 604 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 THUMPD3Q9BV44 507 aaKnown RBP18.33■□□□□ 0.52
SS18-224ENST00000584083 LAT2Q9GZY6 243 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 RMND5AQ9H871 391 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 INTS9Q9NV88 658 aaKnown RBP18.33■□□□□ 0.52
SS18-224ENST00000584083 DNAJB12Q9NXW2 375 aaKnown RBP18.33■□□□□ 0.52
SS18-224ENST00000584083 ITGB1BP2Q9UKP3 347 aa18.33■□□□□ 0.52
SS18-224ENST00000584083 HMGN4O00479 90 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 POLR3GO15318 223 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms