RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 APOBEC3FQ8IUX4 373 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 LACC1Q8IV20 430 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 CENPSQ8N2Z9 138 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF786Q8N393 782 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 GCSAMQ8N6F7 178 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF614Q8N883 585 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 AMER3Q8N944 861 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 HJURPQ8NCD3 748 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 PSMA8Q8TAA3 256 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 AGR3Q8TD06 166 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 SLC2A14Q8TDB8 520 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 MRGPRDQ8TDS7 321 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 RAB2BQ8WUD1 216 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 PTPMT1Q8WUK0 201 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 S100ZQ8WXG8 99 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 CORO2AQ92828 525 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ISG20Q96AZ6 181 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 TADA1Q96BN2 335 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 PPWD1Q96BP3 646 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 NRBF2Q96F24 287 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ATXN7L3BQ96GX2 97 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 SH3YL1Q96HL8 342 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 MAGED4Q96JG8 741 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ELMO2Q96JJ3 720 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 LINC00615Q96LM1 132 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 CEP295NLQ96MC4 621 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF560Q96MR9 790 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 GLT1D1Q96MS3 346 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF558Q96NG5 402 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF300Q96RE9 604 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 TBL1YQ9BQ87 522 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 RTP3Q9BQQ7 232 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 FEM1AQ9BSK4 669 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 C16orf70Q9BSU1 422 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ERVK-6Q9BXR3 956 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 SLC5A7Q9GZV3 580 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 GORASP2Q9H8Y8 452 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 NTN4Q9HB63 628 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 CSNK1G1Q9HCP0 422 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 HPS4Q9NQG7 708 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 INIPQ9NRY2 104 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 FAM49BQ9NUQ9 324 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 SMPD3Q9NY59 655 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 HAO2Q9NYQ3 351 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 USE1Q9NZ43 259 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 GDE1Q9NZC3 331 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 SEPT10Q9P0V9 454 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 OR12D3Q9UGF7 316 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 SH3BGRL2Q9UJC5 107 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 EXO1Q9UQ84 846 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 TMED5Q9Y3A6 229 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 NAALAD2Q9Y3Q0 740 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 PLXNA1Q9UIW2 1896 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 A0A0G2JMZ2 1700 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 LOC285095A0A1B0GVY8 99 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 A0A1W2PPW3 197 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 NEMP2A6NFY4 417 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 ANXA2P2A6NMY6 339 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 C15orf62A8K5M9 175 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 CLDN25C9JDP6 229 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 PLK4O00444 970 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 AZIN1O14977 448 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 ARPC2O15144 300 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 OGG1O15527 345 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 TXNL1O43396 289 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 HUS1O60921 280 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 E2F6O75461 281 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 EEDO75530 441 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 IGLV3-25P01717 112 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 LGALS2P05162 132 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 ALOX5P09917 674 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 VPREB1P12018 145 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 CD1DP15813 335 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 IL1RNP18510 177 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 ITIH1P19827 911 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 CDH3P22223 829 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 CBLP22681 906 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 GATA2P23769 480 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 CRHBPP24387 322 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 ADORA2BP29275 332 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 CEACAM8P31997 349 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 LHX1P48742 406 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 GSK3BP49841 420 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 ATXN3P54252 364 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 KRTAP12-2P59991 146 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 GABARAPL2P60520 117 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 CXCR4P61073 352 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 STX1BP61266 288 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 CCNA1P78396 465 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 MRPS34P82930 218 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 ADIGQ0VDE8 80 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 MFAP5Q13361 173 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 IL18R1Q13478 541 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF273Q14593 569 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 LASP1Q14847 261 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 PPP1R3AQ16821 1122 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 RGS21Q2M5E4 152 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 TCTEX1D4Q5JR98 221 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 BRMS1LQ5PSV4 323 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms