RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	CXorf56	Q9H5V9	222 aa		10.36	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ANKZF1	Q9H8Y5	726 aa		10.36	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	FANCF	Q9NPI8	374 aa		10.36	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	DUSP22	Q9NRW4	184 aa		10.36	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ATP6V1H	Q9UI12	483 aa		10.36	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	FAF1	Q9UNN5	650 aa	Predicted RBP	10.36	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	GPR52	Q9Y2T5	361 aa		10.36	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114		A0A1W2PNR3	127 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	TMEM114	B3SHH9	223 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114		C9JVG2	144 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	CFLAR	O15519	480 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	GCM2	O75603	506 aa	Predicted RBP	10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	CYP7B1	O75881	506 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ADA	P00813	363 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	PSMB1	P20618	241 aa	Known RBP	10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ENPP1	P22413	925 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	IL32	P24001	234 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	LCN1	P31025	176 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ARRB2	P32121	409 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	SOAT1	P35610	550 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	EIF1	P41567	113 aa	Known RBP	10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	P2RX1	P51575	399 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	CCR4	P51679	360 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	RPS26	P62854	115 aa	Known RBP	10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	PPP2R2B	Q00005	443 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	KLHL26	Q53HC5	615 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	GTF2IRD2B	Q6EKJ0	949 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	RNF165	Q6ZSG1	346 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	FCRLA	Q7L513	359 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	OLIG3	Q7RTU3	272 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	GTF2IRD2	Q86UP8	949 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	LSR	Q86X29	649 aa	Predicted RBP	10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	CNPY4	Q8N129	248 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	CLEC4F	Q8N1N0	589 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ZNF611	Q8N823	705 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ZNF527	Q8NB42	609 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	STEAP2	Q8NFT2	490 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	OR5D16	Q8NGK9	328 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	GPR119	Q8TDV5	335 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ADAMTS15	Q8TE58	950 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	OR5P2	Q8WZ92	322 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	CPNE4	Q96A23	557 aa	Predicted RBP	10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ZNF775	Q96BV0	537 aa	Predicted RBP	10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	MTERF3	Q96E29	417 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	APOPT1	Q96IL0	206 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	PPP3R2	Q96LZ3	170 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	STAC	Q99469	402 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ACTRT3	Q9BYD9	372 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	HHATL	Q9HCP6	504 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	TIGAR	Q9NQ88	270 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	GPATCH2	Q9NW75	528 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	KLHL13	Q9P2N7	655 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	DNHD1	Q96M86	4753 aa		10.35	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ZAN	Q9Y493	2812 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	NUP214	P35658	2090 aa	Predicted RBP	10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114		H3BNH8	94 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	NPHS1	O60500	1241 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	HSPA4L	O95757	839 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	PRKCA	P17252	672 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	DDX5	P17844	614 aa	Known RBP	10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ELK4	P28324	431 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	MAPK1	P28482	360 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	CASP9	P55211	416 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	RPS4X	P62701	263 aa	Known RBP	10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	TNK1	Q13470	666 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	MLC1	Q15049	377 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	RNPS1	Q15287	305 aa	Known RBP	10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	TAB1	Q15750	504 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	STK11	Q15831	433 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ATP6AP1L	Q52LC2	224 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	XKR7	Q5GH72	579 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	PDZK1	Q5T2W1	519 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	SFRP5	Q5T4F7	317 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	IL23R	Q5VWK5	629 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	MTERF4	Q7Z6M4	381 aa	Known RBP	10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	GABRG1	Q8N1C3	465 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	BANP	Q8N9N5	519 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	FNDC5	Q8NAU1	212 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	OR56A1	Q8NGH5	318 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	LILRB1	Q8NHL6	650 aa	Predicted RBP	10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ZFP90	Q8TF47	636 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	DNAJA3	Q96EY1	480 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	OR7D2	Q96RA2	312 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	MDFI	Q99750	246 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	TMEM204	Q9BSN7	226 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	COQ10B	Q9H8M1	238 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	PPCS	Q9HAB8	311 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	EML4	Q9HC35	981 aa	Known RBP	10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ZNF701	Q9NV72	531 aa	Predicted RBP	10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ZDHHC2	Q9UIJ5	367 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ICAM5	Q9UMF0	924 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	RNF115	Q9Y4L5	304 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	GPC6	Q9Y625	555 aa	Predicted RBP	10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	CSPG4	Q6UVK1	2322 aa		10.34	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	FREM1	Q5H8C1	2179 aa		10.33	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	TLN2	Q9Y4G6	2542 aa		10.33	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	CENPVL1	A0A0U1RR11	272 aa		10.33	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	GJE1	A6NN92	205 aa		10.33	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	RNF223	E7ERA6	249 aa		10.33	□□□□□ -0.76

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