RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 OR1Q1Q15612 314 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 TRMT12Q53H54 448 aaKnown RBP12.72□□□□□ -0.37
RNF43-205ENST00000581868 LYPD4Q6UWN0 246 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 SYT9Q86SS6 491 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 BMPERQ8N8U9 685 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 KISS1RQ969F8 398 aaPredicted RBP12.72□□□□□ -0.37
RNF43-205ENST00000581868 DACT3Q96B18 629 aaPredicted RBP12.72□□□□□ -0.37
RNF43-205ENST00000581868 SDF2Q99470 211 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 SYNDIG1Q9H7V2 258 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 CXXC1Q9P0U4 656 aaPredicted RBP12.72□□□□□ -0.37
RNF43-205ENST00000581868 MGAT4AQ9UM21 535 aa12.72□□□□□ -0.37
RNF43-205ENST00000581868 TRBV23OR9-2A0A075B6M9 112 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 TRAV27A0A087WT01 109 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 A0A1W2PRG6 482 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 FAM86C2PA6NEL3 165 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 MEN1O00255 615 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 PEX12O00623 359 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 CRYZL1O95825 349 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 CEACAM5P06731 702 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 SYPP08247 313 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 NPR2P20594 1047 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 SRP54P61011 504 aaKnown RBP12.71□□□□□ -0.37
RNF43-205ENST00000581868 EEF1A1P68104 462 aaKnown RBP12.71□□□□□ -0.37
RNF43-205ENST00000581868 HTRA4P83105 476 aaPredicted RBP12.71□□□□□ -0.37
RNF43-205ENST00000581868 FOXK2Q01167 660 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 CEBPEQ15744 281 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 RPE65Q16518 533 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 MTFR2Q6P444 385 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 FAM109AQ8N4B1 249 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 ZNF431Q8TF32 576 aaPredicted RBP12.71□□□□□ -0.37
RNF43-205ENST00000581868 HSD17B8Q92506 261 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 AHCYL2Q96HN2 611 aaKnown RBP12.71□□□□□ -0.37
RNF43-205ENST00000581868 C10orf90Q96M02 699 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 LYARQ9NX58 379 aaKnown RBP12.71□□□□□ -0.37
RNF43-205ENST00000581868 CLDND1Q9NY35 253 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 STMN3Q9NZ72 180 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 ING4Q9UNL4 249 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 SCN2AQ99250 2005 aa12.71□□□□□ -0.37
RNF43-205ENST00000581868 TBC1D3KA0A087X1G2 549 aa12.71□□□□□ -0.38
RNF43-205ENST00000581868 LOC105369274A0A096LPK9 316 aa12.71□□□□□ -0.38
RNF43-205ENST00000581868 TBC1D3FA6NER0 549 aaPredicted RBP12.71□□□□□ -0.38
RNF43-205ENST00000581868 MAGEB4O15481 346 aaPredicted RBP12.71□□□□□ -0.38
RNF43-205ENST00000581868 RFPL3O75679 317 aa12.71□□□□□ -0.38
RNF43-205ENST00000581868 SOX30O94993 753 aa12.71□□□□□ -0.38
RNF43-205ENST00000581868 HK1P19367 917 aa12.71□□□□□ -0.38
RNF43-205ENST00000581868 MAT2AP31153 395 aaKnown RBP12.71□□□□□ -0.38
RNF43-205ENST00000581868 PYCR1P32322 319 aa12.71□□□□□ -0.38
RNF43-205ENST00000581868 CST6Q15828 149 aa12.71□□□□□ -0.38
RNF43-205ENST00000581868 ARHGAP11BQ3KRB8 267 aa12.71□□□□□ -0.38
RNF43-205ENST00000581868 DEFB134Q4QY38 66 aa12.71□□□□□ -0.38
RNF43-205ENST00000581868 MRPL2Q5T653 305 aaKnown RBP12.71□□□□□ -0.38
RNF43-205ENST00000581868 TBC1D3GQ6DHY5 549 aa12.71□□□□□ -0.38
RNF43-205ENST00000581868 PSRC1Q6PGN9 363 aaPredicted RBP12.71□□□□□ -0.38
RNF43-205ENST00000581868 TMEFF1Q8IYR6 380 aa12.71□□□□□ -0.38
RNF43-205ENST00000581868 OR4N4Q8N0Y3 316 aa12.71□□□□□ -0.38
RNF43-205ENST00000581868 SHISA5Q8N114 240 aa12.71□□□□□ -0.38
RNF43-205ENST00000581868 OR11H7Q8NGC8 314 aa12.71□□□□□ -0.38
RNF43-205ENST00000581868 OR4K14Q8NGD5 310 aa12.71□□□□□ -0.38
RNF43-205ENST00000581868 ZNF223Q9UK11 482 aaPredicted RBP12.71□□□□□ -0.38
RNF43-205ENST00000581868 ZMIZ1Q9ULJ6 1067 aa12.71□□□□□ -0.38
RNF43-205ENST00000581868 CDHR4A6H8M9 788 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 ZNF860A6NHJ4 632 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 RNGTTO60942 597 aaKnown RBP12.7□□□□□ -0.38
RNF43-205ENST00000581868 LAMP2P13473 410 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 POU3F3P20264 500 aaPredicted RBP12.7□□□□□ -0.38
RNF43-205ENST00000581868 STOMP27105 288 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 GIFP27352 417 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 ARFIP1P53367 373 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 HCCSP53701 268 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 SGCGQ13326 291 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 ACSM3Q53FZ2 586 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 VITQ6UXI7 678 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 ESPNLQ6ZVH7 1005 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 VN1R4Q7Z5H5 301 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 LNX2Q8N448 690 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 TOMM5Q8N4H5 51 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 ZNF655Q8N720 491 aaPredicted RBP12.7□□□□□ -0.38
RNF43-205ENST00000581868 TOR1AIP2Q8NFQ8 470 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 OR5J2Q8NH18 312 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 GRHL3Q8TE85 626 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 KCTD12Q96CX2 325 aaKnown RBP12.7□□□□□ -0.38
RNF43-205ENST00000581868 BPIFA2Q96DR5 249 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 MKRN2Q9H000 416 aaKnown RBP12.7□□□□□ -0.38
RNF43-205ENST00000581868 DPAGT1Q9H3H5 408 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 CAPN10Q9HC96 672 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 USP36Q9P275 1121 aaKnown RBP12.7□□□□□ -0.38
RNF43-205ENST00000581868 A0A0G2JK05 382 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 TEX13CA0A0J9YWL9 993 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 PLPP2O43688 288 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 SNRPBP14678 240 aaKnown RBP12.7□□□□□ -0.38
RNF43-205ENST00000581868 IL9P15248 144 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 CCR6P51684 374 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 SLC36A2Q495M3 483 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 EIPR1Q53HC9 387 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 PYHIN1Q6K0P9 492 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 FIGNL1Q6PIW4 674 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 CDK20Q8IZL9 346 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 LCN9Q8WX39 176 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 SMPDL3BQ92485 455 aa12.7□□□□□ -0.38
RNF43-205ENST00000581868 GHSRQ92847 366 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms