RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 AKR7A3O95154 331 aa3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 GCFC2P16383 781 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 TNNI3P19429 210 aa3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 BTDP43251 543 aa3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 LAGE3Q14657 143 aa3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 ACSM5Q6NUN0 579 aa3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 ARSKQ6UWY0 536 aa3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 APTXQ7Z2E3 356 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 LINC01561Q8N1V8 128 aa3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 TMEM252Q8N6L7 170 aa3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 ZNF285Q96NJ3 590 aa3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 SDHCQ99643 169 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 CITED1Q99966 193 aa3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 NANOGQ9H9S0 305 aa3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 NAP1L2Q9ULW6 460 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 PLLPQ9Y342 182 aa3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 IFT52Q9Y366 437 aa3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 OARD1Q9Y530 152 aa3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 ATRXP46100 2492 aa3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 MEGF6O75095 1541 aa3.02□□□□□ -1.93
SMCHD1-204ENST00000581226 A0A0J9YXY3 114 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 ZNF705EA8MWA4 302 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 F8WDY8 70 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 K7N7A8 449 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 CHADO15335 359 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 LANCL1O43813 399 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 MBD3O95983 291 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 F10P00742 488 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 IGHV3-48P01763 117 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 OPN1LWP04000 364 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 IGF1P05019 195 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 MDKP21741 143 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 CYP2F1P24903 491 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 AQP1P29972 269 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 HPDP32754 393 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 UGT1A5P35504 534 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 RIPPLY1Q0D2K3 151 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 SLC10A7Q0GE19 358 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 PDZK1IP1Q13113 114 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 INAQ16352 499 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 KRTAP13-3Q3SY46 172 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 ATF7IP2Q5U623 682 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 LIPNQ5VXI9 398 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 FAHD2BQ6P2I3 314 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 IL34Q6ZMJ4 242 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 TMEM17Q86X19 198 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 CCDC71LQ8N9Z2 235 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 NANPQ8TBE9 248 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 AENQ8WTP8 325 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 C7orf33Q8WU49 177 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 SLC5A11Q8WWX8 675 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 DCUN1D4Q92564 292 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 FAHD2AQ96GK7 314 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 MCHR1Q99705 422 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 RNF126Q9BV68 326 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 DUSP16Q9BY84 665 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 NANSQ9NR45 359 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 WRAP73Q9P2S5 460 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 DCDC2Q9UHG0 476 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 LCMT1Q9UIC8 334 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 B9D1Q9UPM9 204 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 SCML2Q9UQR0 700 aa3.01□□□□□ -1.93
SMCHD1-204ENST00000581226 A0A1B0GUL7 405 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 ESYT2A0FGR8 921 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 BICDL2A1A5D9 508 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 USP27XA6NNY8 438 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 KRTAP5-8O75690 187 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 B3GAT3O94766 335 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 SUPT7LO94864 414 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 CALB2P22676 271 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 DLSTP36957 453 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 NUCB2P80303 420 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 TIGITQ495A1 244 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 CCDC92Q53HC0 331 aaPredicted RBP3□□□□□ -1.93
SMCHD1-204ENST00000581226 WDR74Q6RFH5 385 aaPredicted RBP3□□□□□ -1.93
SMCHD1-204ENST00000581226 CBLN3Q6UW01 205 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 FAM220AQ7Z4H9 259 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 MKXQ8IYA7 352 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 DCAF4L2Q8NA75 395 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 LINC01555Q8NAE3 123 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 CELF6Q96J87 481 aaKnown RBP3□□□□□ -1.93
SMCHD1-204ENST00000581226 MRPL13Q9BYD1 178 aaKnown RBP3□□□□□ -1.93
SMCHD1-204ENST00000581226 SRXN1Q9BYN0 137 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 RWDD1Q9H446 243 aaPredicted RBP3□□□□□ -1.93
SMCHD1-204ENST00000581226 NARFLQ9H6Q4 476 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 ACTR3BQ9P1U1 418 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 NEU3Q9UQ49 428 aa3□□□□□ -1.93
SMCHD1-204ENST00000581226 PP2D1A8MPX8 630 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 SULT2B1O00204 365 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 CSF2P04141 144 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 HOXC4P09017 264 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 PSMA2P25787 234 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 CD1BP29016 333 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 NMT1P30419 496 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 ADSSP30520 456 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 UCNP55089 124 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 SCGB2A2Q13296 93 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 ZNF630Q2M218 657 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 ZNF658BQ4V348 819 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 C12orf60Q5U649 245 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms