RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ZNF563Q8TA94 476 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 NR4A3Q92570 626 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 CNOT9Q92600 299 aaKnown RBP13.02□□□□□ -0.33
SKA2-205ENST00000580541 ARSGQ96EG1 525 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 MS4A3Q96HJ5 214 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 SH3YL1Q96HL8 342 aaPredicted RBP13.02□□□□□ -0.33
SKA2-205ENST00000580541 GNRHR2Q96P88 292 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 ZNF559Q9BR84 538 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 HES7Q9BYE0 225 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 TRIM2Q9C040 744 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 POLR2J2Q9GZM3 115 aaKnown RBP13.02□□□□□ -0.33
SKA2-205ENST00000580541 POLR2J3Q9H1A7 115 aaKnown RBP13.02□□□□□ -0.33
SKA2-205ENST00000580541 TMEM27Q9HBJ8 222 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 DEPPQ9NTK1 212 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 RLIMQ9NVW2 624 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 DNAJB12Q9NXW2 375 aaKnown RBP13.02□□□□□ -0.33
SKA2-205ENST00000580541 TUBA8Q9NY65 449 aaPredicted RBP13.02□□□□□ -0.33
SKA2-205ENST00000580541 SELENONQ9NZV5 590 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 MED11Q9P086 117 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 FAM32AQ9Y421 112 aaKnown RBP13.02□□□□□ -0.33
SKA2-205ENST00000580541 CSAG2Q9Y5P2 127 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 LINC01387J3KSC0 135 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 FAAHO00519 579 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 TPST1O60507 370 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 FMO6PO60774 539 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 PRKD3O94806 890 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 IFNW1P05000 195 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 GPIP06744 558 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 CD247P20963 164 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 PSMA4P25789 261 aaKnown RBP13.01□□□□□ -0.33
SKA2-205ENST00000580541 FKBP2P26885 142 aaKnown RBP13.01□□□□□ -0.33
SKA2-205ENST00000580541 DPP4P27487 766 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 GDF1P27539 372 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 SRD5A2P31213 254 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 HTR3AP46098 478 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 ZNF117Q03924 483 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 CHRNB3Q05901 458 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 FOXO1Q12778 655 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 SKP2Q13309 424 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 FAM180AQ6UWF9 173 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 CYP4Z1Q86W10 505 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 FAM109AQ8N4B1 249 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 ST8SIA1Q92185 356 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 ZBTB8AQ96BR9 441 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 TTTY12Q9BZ98 90 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 MAGIXQ9H6Y5 334 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 AGPAT4Q9NRZ5 378 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 RPS6KB2Q9UBS0 482 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 TESQ9UGI8 421 aaKnown RBP13.01□□□□□ -0.33
SKA2-205ENST00000580541 ANAPC2Q9UJX6 822 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 DKKL1Q9UK85 242 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 ICAM5Q9UMF0 924 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 LHX6Q9UPM6 363 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 C15orf41Q9Y2V0 281 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 PKD1L2Q7Z442 2459 aa13.01□□□□□ -0.33
SKA2-205ENST00000580541 CENPVL1A0A0U1RR11 272 aa13□□□□□ -0.33
SKA2-205ENST00000580541 CLDN24A6NM45 220 aa13□□□□□ -0.33
SKA2-205ENST00000580541 TFECO14948 347 aaPredicted RBP13□□□□□ -0.33
SKA2-205ENST00000580541 TRAPPC6AO75865 159 aa13□□□□□ -0.33
SKA2-205ENST00000580541 SORBS2O94875 1100 aaKnown RBP13□□□□□ -0.33
SKA2-205ENST00000580541 GLSO94925 669 aaPredicted RBP13□□□□□ -0.33
SKA2-205ENST00000580541 GP1BBP13224 206 aa13□□□□□ -0.33
SKA2-205ENST00000580541 ZNF24P17028 368 aa13□□□□□ -0.33
SKA2-205ENST00000580541 ADH6P28332 368 aa13□□□□□ -0.33
SKA2-205ENST00000580541 RYKP34925 604 aa13□□□□□ -0.33
SKA2-205ENST00000580541 MAP2K6P52564 334 aa13□□□□□ -0.33
SKA2-205ENST00000580541 ALDH6A1Q02252 535 aaKnown RBP13□□□□□ -0.33
SKA2-205ENST00000580541 EPS8Q12929 822 aa13□□□□□ -0.33
SKA2-205ENST00000580541 NRF1Q16656 503 aa13□□□□□ -0.33
SKA2-205ENST00000580541 NADK2Q4G0N4 442 aa13□□□□□ -0.33
SKA2-205ENST00000580541 WBP2NLQ6ICG8 309 aa13□□□□□ -0.33
SKA2-205ENST00000580541 CBLN3Q6UW01 205 aa13□□□□□ -0.33
SKA2-205ENST00000580541 CARM1Q86X55 608 aa13□□□□□ -0.33
SKA2-205ENST00000580541 GPR32P1Q8NGA4 272 aa13□□□□□ -0.33
SKA2-205ENST00000580541 GPR119Q8TDV5 335 aa13□□□□□ -0.33
SKA2-205ENST00000580541 C1GALT1C1Q96EU7 318 aa13□□□□□ -0.33
SKA2-205ENST00000580541 RSRC1Q96IZ7 334 aaKnown RBP13□□□□□ -0.33
SKA2-205ENST00000580541 HSH2DQ96JZ2 352 aa13□□□□□ -0.33
SKA2-205ENST00000580541 ARHGDIGQ99819 225 aa13□□□□□ -0.33
SKA2-205ENST00000580541 RTN4RQ9BZR6 473 aa13□□□□□ -0.33
SKA2-205ENST00000580541 ATXN7O15265 892 aaPredicted RBP12.99□□□□□ -0.33
SKA2-205ENST00000580541 GKN3PP0CG01 181 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 HK1P19367 917 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 SLC1A3P43003 542 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 IDH2P48735 452 aaKnown RBP12.99□□□□□ -0.33
SKA2-205ENST00000580541 CRYBA2P53672 197 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 LY6DQ14210 128 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.99□□□□□ -0.33
SKA2-205ENST00000580541 GLIPR1L2Q4G1C9 344 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 KRTCAP3Q53RY4 240 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 AAGABQ6PD74 315 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 LSMEM1Q8N8F7 131 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 OR14L1PQ8NHC6 308 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 DNAJA4Q8WW22 397 aaPredicted RBP12.99□□□□□ -0.33
SKA2-205ENST00000580541 SLC47A1Q96FL8 570 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 MRGPRX4Q96LA9 322 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 ZNF347Q96SE7 839 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 MCHR1Q99705 422 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 PIGQQ9BRB3 760 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 LDAHQ9H6V9 325 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms