RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 POLE3Q9NRF9 147 aa16.82■□□□□ 0.28
PPP4R1-215ENST00000580182 SLC25A37Q9NYZ2 338 aa16.82■□□□□ 0.28
PPP4R1-215ENST00000580182 AP4B1Q9Y6B7 739 aa16.82■□□□□ 0.28
PPP4R1-215ENST00000580182 HCFC1P51610 2035 aa16.82■□□□□ 0.28
PPP4R1-215ENST00000580182 C7orf72A4D263 438 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 CLDN24A6NM45 220 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 HNRNPRO43390 633 aaKnown RBP16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 EFNA2O43921 213 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 EIF4E2O60573 245 aaKnown RBP16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 CSTAP01040 98 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 GUSBP08236 651 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 PRF1P14222 555 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 COX6B1P14854 86 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 CCR4P51679 360 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 HPCAP84074 193 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 SKP2Q13309 424 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 FGFBP1Q14512 234 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 MSRB3Q8IXL7 192 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 FBXO27Q8NI29 283 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 FIG4Q92562 907 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 WNT2BQ93097 391 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 TRNT1Q96Q11 434 aaKnown RBP16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 LAT2Q9GZY6 243 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 TMEM185BQ9H7F4 350 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 LIPT1Q9Y234 373 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 ADGRG4Q8IZF6 3080 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 DOCK7Q96N67 2140 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 UNC79Q9P2D8 2635 aa16.81■□□□□ 0.28
PPP4R1-215ENST00000580182 A0A096LPI6 279 aa16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 VIMP08670 466 aaKnown RBP16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 NUDT7P0C024 238 aa16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 UBTFL6P0CB48 400 aaPredicted RBP16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 TMIGD3P0DMS9 266 aaPredicted RBP16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 NR2F1P10589 423 aa16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 PGM1P36871 562 aa16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 ANXA11P50995 505 aaKnown RBP16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 SUMO3P55854 103 aaPredicted RBP16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 TXNL4AP83876 142 aaKnown RBP16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 PLAURQ03405 335 aa16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 SLC25A35Q3KQZ1 300 aa16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 LRRC74BQ6ZQY2 392 aa16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 CHMP1BQ7LBR1 199 aa16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 GRAMD2AQ8IUY3 354 aa16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 GCNT2Q8N0V5 402 aa16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 OR5W2Q8NH69 310 aa16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 INTS12Q96CB8 462 aaKnown RBP16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 SIKE1Q9BRV8 207 aa16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 THUMPD3Q9BV44 507 aaKnown RBP16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 PINK1Q9BXM7 581 aa16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 ENKD1Q9H0I2 346 aa16.8■□□□□ 0.28
PPP4R1-215ENST00000580182 HEATR5AQ86XA9 2040 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 CLIC1O00299 241 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 EIF1AYO14602 144 aaKnown RBP16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 DVL2O14641 736 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 RCBTB2O95199 551 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 PRKCAP17252 672 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 CTSSP25774 331 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 SHC1P29353 583 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 DSTNP60981 165 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 KCNJ10P78508 379 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 QPRTQ15274 297 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 RGNQ15493 299 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 CTU2Q2VPK5 515 aaKnown RBP16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 LRIF1Q5T3J3 769 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 MEX3BQ6ZN04 569 aaKnown RBP16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 EIF3MQ7L2H7 374 aaKnown RBP16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 P4HA3Q7Z4N8 544 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 LSRQ86X29 649 aaPredicted RBP16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 METTL25Q8N6Q8 603 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 ACBD4Q8NC06 268 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 TOR1AIP2Q8NFQ8 470 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 ADGRG7Q96K78 797 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 TM9SF2Q99805 663 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 TMEM45AQ9NWC5 275 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 VAPAQ9P0L0 249 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 ZNF629Q9UEG4 869 aaPredicted RBP16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 TRIM33Q9UPN9 1127 aa16.79■□□□□ 0.28
PPP4R1-215ENST00000580182 A0A0J9YW62 118 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 AGAP5A6NIR3 686 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 SLC22A20A6NK97 555 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 ATP8B1O43520 1251 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 BCHEP06276 602 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 TFPTP0C1Z6 253 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 IGFBP2P18065 325 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 EIF1AXP47813 144 aaKnown RBP16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 DLX5P56178 289 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 EEFSECP57772 596 aaKnown RBP16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 RAC1P63000 192 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 IRX1P78414 480 aaPredicted RBP16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 SNTB1Q13884 538 aaKnown RBP16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 CBFBQ13951 182 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 PON3Q15166 354 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 RPS26P11Q5JNZ5 115 aaPredicted RBP16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 C10orf111Q8N326 155 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 FAM71CQ8NEG0 241 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 FNDC9Q8TBE3 224 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 SLC38A5Q8WUX1 472 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 RABEP2Q9H5N1 569 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 CCDC134Q9H6E4 229 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms