RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 NKX2-2O95096 273 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 WDPCPO95876 746 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 CRYABP02511 175 aaKnown RBP9.34□□□□□ -0.91
SS18-210ENST00000578700 DBIP07108 87 aaKnown RBP9.34□□□□□ -0.91
SS18-210ENST00000578700 LYNP07948 512 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 CELA2AP08217 269 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 ZGLP1P0C6A0 271 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 ACP2P11117 423 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 TNFRSF1BP20333 461 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 MYF6P23409 242 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 SSTR2P30874 369 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 YAP1P46937 504 aaKnown RBP9.34□□□□□ -0.91
SS18-210ENST00000578700 ST13P50502 369 aaKnown RBP9.34□□□□□ -0.91
SS18-210ENST00000578700 SMSP52788 366 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 EMP2P54851 167 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 PSMD4P55036 377 aaKnown RBP9.34□□□□□ -0.91
SS18-210ENST00000578700 PPP2R2BQ00005 443 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 PMP22Q01453 160 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 CHRNEQ04844 493 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 MGAT2Q10469 447 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 IL18R1Q13478 541 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 ELAVL1Q15717 326 aaKnown RBP9.34□□□□□ -0.91
SS18-210ENST00000578700 NSDHLQ15738 373 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 C3AR1Q16581 482 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 KRTAP21-3Q3LHN1 58 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 ZIK1Q3SY52 487 aaPredicted RBP9.34□□□□□ -0.91
SS18-210ENST00000578700 SLC36A3Q495N2 470 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 FGD3Q5JSP0 725 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 TMEM154Q6P9G4 183 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 TTC33Q6PID6 262 aaPredicted RBP9.34□□□□□ -0.91
SS18-210ENST00000578700 DHRS4L2Q6PKH6 230 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 LAPTM4BQ86VI4 370 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 CHERPQ8IWX8 916 aaKnown RBP9.34□□□□□ -0.91
SS18-210ENST00000578700 ZNF619Q8N2I2 560 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 SETD9Q8NE22 299 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 METTL21AQ8WXB1 218 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 HAS2Q92819 552 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 DAZLQ92904 295 aaKnown RBP9.34□□□□□ -0.91
SS18-210ENST00000578700 LMF2Q9BU23 707 aaKnown RBP9.34□□□□□ -0.91
SS18-210ENST00000578700 FNDC11Q9BVV2 318 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 AMBRA1Q9C0C7 1298 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 SLC26A1Q9H2B4 701 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 SLC38A1Q9H2H9 487 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 SMURF2Q9HAU4 748 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 FOLH1BQ9HBA9 442 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 COPS7AQ9UBW8 275 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 TINAGQ9UJW2 476 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 MKL2Q9ULH7 1088 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 OR10H1Q9Y4A9 318 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 KCNE3Q9Y6H6 103 aa9.34□□□□□ -0.91
SS18-210ENST00000578700 DSPPQ9NZW4 1301 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 SPG11Q96JI7 2443 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 NADKO95544 446 aaPredicted RBP9.33□□□□□ -0.92
SS18-210ENST00000578700 SNAP29O95721 258 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 OXSR1O95747 527 aaPredicted RBP9.33□□□□□ -0.92
SS18-210ENST00000578700 CBX7O95931 251 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 ONECUT2O95948 504 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 LGI1O95970 557 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 H1F0P07305 194 aaKnown RBP9.33□□□□□ -0.92
SS18-210ENST00000578700 HEXBP07686 556 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 THBS1P07996 1170 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 GUSBP08236 651 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 CT62P0C5K7 136 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 PRKACGP22612 351 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 IFNGR2P38484 337 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 GCGRP47871 477 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 RGS8P57771 180 aaPredicted RBP9.33□□□□□ -0.92
SS18-210ENST00000578700 PSPHP78330 225 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 ADORA2A-AS1P86434 159 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 TLE4Q04727 773 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 FUT5Q11128 374 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 PPP1R8Q12972 351 aaKnown RBP9.33□□□□□ -0.92
SS18-210ENST00000578700 DUSP8Q13202 625 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 BLMHQ13867 455 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 GANABQ14697 944 aaKnown RBP9.33□□□□□ -0.92
SS18-210ENST00000578700 CDSNQ15517 529 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 GPR68Q15743 365 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 MAPK11Q15759 364 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 MICAQ29983 383 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 CYP27C1Q4G0S4 372 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 FLYWCH1Q4VC44 716 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 DCST1Q5T197 706 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 HLA-DQA1Q5Y7H0 255 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 TBPL2Q6SJ96 375 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 UGT2A3Q6UWM9 527 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 NCCRP1Q6ZVX7 275 aaPredicted RBP9.33□□□□□ -0.92
SS18-210ENST00000578700 NDUFAF7Q7L592 441 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 WDR53Q7Z5U6 358 aaPredicted RBP9.33□□□□□ -0.92
SS18-210ENST00000578700 CDH24Q86UP0 819 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 RANBP3LQ86VV4 465 aaPredicted RBP9.33□□□□□ -0.92
SS18-210ENST00000578700 C8orf59Q8N0T1 100 aaPredicted RBP9.33□□□□□ -0.92
SS18-210ENST00000578700 OR10G2Q8NGC3 310 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 OR52J3Q8NH60 311 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 OR14A16Q8NHC5 309 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 PSMF1Q92530 271 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 RMND5BQ96G75 393 aaPredicted RBP9.33□□□□□ -0.92
SS18-210ENST00000578700 ALPK1Q96QP1 1244 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 SDF2Q99470 211 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 APOL4Q9BPW4 351 aa9.33□□□□□ -0.92
SS18-210ENST00000578700 OR10A5Q9H207 317 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms