RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 FAM222BQ8WU58 562 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 AURKBQ96GD4 344 aaPredicted RBP11.54□□□□□ -0.56
CCDC57-211ENST00000578187 WDYHV1Q96HA8 205 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 SFXN2Q96NB2 322 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 CALHM2Q9HA72 323 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 SLC25A37Q9NYZ2 338 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 KLHL14Q9P2G3 628 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 KCNE5Q9UJ90 142 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 MKLN1Q9UL63 735 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 LIPT1Q9Y234 373 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 WDR45Q9Y484 360 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 PCDHB14Q9Y5E9 798 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 GMEB1Q9Y692 573 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 DOCK7Q96N67 2140 aa11.54□□□□□ -0.56
CCDC57-211ENST00000578187 A0A087WZY1 265 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 C7orf72A4D263 438 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 TUBAL3A6NHL2 446 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 EEF1E1-BLOC1S5C9J1V9 151 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 H0Y3Z8 333 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 H3BNH8 94 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 EEF1E1O43324 174 aaKnown RBP11.53□□□□□ -0.56
CCDC57-211ENST00000578187 OIP5O43482 229 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 CPN1P15169 458 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 ZNF708P17019 499 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 ZNF17P17021 662 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 CTSSP25774 331 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 LHX2P50458 406 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 SUMO3P55854 103 aaPredicted RBP11.53□□□□□ -0.56
CCDC57-211ENST00000578187 HPCAP84074 193 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 ZNF117Q03924 483 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 MAPK11Q15759 364 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 FBXL19-AS1Q494R0 122 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 PDZK1Q5T2W1 519 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 SEM1Q6ZVN7 128 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 MSRB3Q8IXL7 192 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 ANKFN1Q8N957 763 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 RELL2Q8NC24 303 aaPredicted RBP11.53□□□□□ -0.56
CCDC57-211ENST00000578187 B4GALNT2Q8NHY0 566 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 PHOSPHO1Q8TCT1 267 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 ZPLD1Q8TCW7 415 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 TSPEARQ8WU66 669 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 C10orf82Q8WW14 230 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 ZFP3Q96NJ6 502 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 TRNT1Q96Q11 434 aaKnown RBP11.53□□□□□ -0.56
CCDC57-211ENST00000578187 TM9SF2Q99805 663 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 KLHDC3Q9BQ90 382 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 GPATCH1Q9BRR8 931 aaKnown RBP11.53□□□□□ -0.56
CCDC57-211ENST00000578187 SLC38A1Q9H2H9 487 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 MRGBPQ9NV56 204 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 CRIM1Q9NZV1 1036 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 P2RX2Q9UBL9 471 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 ICAM5Q9UMF0 924 aa11.53□□□□□ -0.56
CCDC57-211ENST00000578187 RPH3AQ9Y2J0 694 aaPredicted RBP11.53□□□□□ -0.56
CCDC57-211ENST00000578187 ANKRD17O75179 2603 aaKnown RBP11.52□□□□□ -0.57
CCDC57-211ENST00000578187 OR2M5A3KFT3 312 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 MBD3L4A6NDZ8 208 aaPredicted RBP11.52□□□□□ -0.57
CCDC57-211ENST00000578187 MBD3L3A6NE82 208 aaPredicted RBP11.52□□□□□ -0.57
CCDC57-211ENST00000578187 SERINC4A6NH21 518 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 MBD3L5A6NJ08 208 aaPredicted RBP11.52□□□□□ -0.57
CCDC57-211ENST00000578187 A6NNC1 897 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 LINC01387J3KSC0 135 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 HCRTR2O43614 444 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 H6PDO95479 791 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 IL18BPO95998 194 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 CHRM4P08173 479 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 TMIGD3P0DMS9 266 aaPredicted RBP11.52□□□□□ -0.57
CCDC57-211ENST00000578187 UBL4AP11441 157 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 BMP2P12643 396 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 ETFAP13804 333 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 TCEA1P23193 301 aaKnown RBP11.52□□□□□ -0.57
CCDC57-211ENST00000578187 DNASE1P24855 282 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 CLDN18P56856 261 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 DSTNP60981 165 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 EEF1A1P68104 462 aaKnown RBP11.52□□□□□ -0.57
CCDC57-211ENST00000578187 CHRNEQ04844 493 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 FADDQ13158 208 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 FGFBP1Q14512 234 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 MAPK14Q16539 360 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 BCL2A1Q16548 175 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 SYPL1Q16563 259 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 PLPPR5Q32ZL2 321 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 GPAT3Q53EU6 434 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 EEF1A1P5Q5VTE0 462 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 RAET1LQ5VY80 246 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 CBLN3Q6UW01 205 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 LRRC74BQ6ZQY2 392 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 ZNF614Q8N883 585 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 NAXEQ8NCW5 288 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 FAM71CQ8NEG0 241 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 TOR1AIP2Q8NFQ8 470 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 MBD3L2Q8NHZ7 208 aaPredicted RBP11.52□□□□□ -0.57
CCDC57-211ENST00000578187 ZBTB8AQ96BR9 441 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 SH3YL1Q96HL8 342 aaPredicted RBP11.52□□□□□ -0.57
CCDC57-211ENST00000578187 FOXC2Q99958 501 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 PIGQQ9BRB3 760 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 RAD21L1Q9H4I0 556 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 RASSF1Q9NS23 344 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 MED17Q9NVC6 651 aa11.52□□□□□ -0.57
CCDC57-211ENST00000578187 THUMPD1Q9NXG2 353 aaKnown RBP11.52□□□□□ -0.57
CCDC57-211ENST00000578187 VAPAQ9P0L0 249 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms