RNA–Protein interactions for RNA: ENST00000577468.2

PTPRM-204, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-204ENST00000577468 TMEM107Q6UX40 140 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 ASCL4Q6XD76 172 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 B3GLCTQ6Y288 498 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 ZNF517Q6ZMY9 492 aaPredicted RBP2.82□□□□□ -1.96
PTPRM-204ENST00000577468 ZNF767PQ75MW2 155 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 ASRGL1Q7L266 308 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 RRM2BQ7LG56 351 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 LYG2Q86SG7 212 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 SCD5Q86SK9 330 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 CALHM1Q8IU99 346 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 FAM219AQ8IW50 185 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 C1orf87Q8N0U7 546 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 LGI2Q8N0V4 545 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 Q8N402 240 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 TMEM156Q8N614 296 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 C12orf76Q8N812 135 aaPredicted RBP2.82□□□□□ -1.96
PTPRM-204ENST00000577468 OR51D1Q8NGF3 324 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 OR52H1Q8NGJ2 320 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 OR51A7Q8NH64 312 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 PIGXQ8TBF5 258 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 M1APQ8TC57 530 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 MARCH1Q8TCQ1 289 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 BLOC1S5Q8TDH9 187 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 PPP4R1Q8TF05 950 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 TMEM239Q8WW34 195 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 TRUB1Q8WWH5 349 aaKnown RBP2.82□□□□□ -1.96
PTPRM-204ENST00000577468 HOXB13Q92826 284 aaPredicted RBP2.82□□□□□ -1.96
PTPRM-204ENST00000577468 TMEM203Q969S6 136 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 FAM131CQ96AQ9 280 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 TMEM45BQ96B21 275 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 PPWD1Q96BP3 646 aaKnown RBP2.82□□□□□ -1.96
PTPRM-204ENST00000577468 SARAFQ96BY9 339 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 BIRC7Q96CA5 298 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 NXNL1Q96CM4 212 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 SH3YL1Q96HL8 342 aaPredicted RBP2.82□□□□□ -1.96
PTPRM-204ENST00000577468 C14orf144Q96I85 54 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 CELF6Q96J87 481 aaKnown RBP2.82□□□□□ -1.96
PTPRM-204ENST00000577468 LMLNQ96KR4 655 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 CAPZA3Q96KX2 299 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 ACCSQ96QU6 501 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 CD180Q99467 661 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 STACQ99469 402 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 IL12RB2Q99665 862 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 MYOCQ99972 504 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 WDR77Q9BQA1 342 aaPredicted RBP2.82□□□□□ -1.96
PTPRM-204ENST00000577468 FEM1AQ9BSK4 669 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 WRAP53Q9BUR4 548 aaKnown RBP2.82□□□□□ -1.96
PTPRM-204ENST00000577468 TMEM109Q9BVC6 243 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 DPH1Q9BZG8 443 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 C1orf198Q9H425 327 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 FZD8Q9H461 694 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 PRDM12Q9H4Q4 367 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 RHOFQ9HBH0 211 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 EML4Q9HC35 981 aaKnown RBP2.82□□□□□ -1.96
PTPRM-204ENST00000577468 HMG20AQ9NP66 347 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 KCNK9Q9NPC2 374 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 SLC2A9Q9NRM0 540 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 IL17RBQ9NRM6 502 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 PIGVQ9NUD9 493 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 BABAM2Q9NXR7 383 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 VNN3Q9NY84 501 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 B3GNT2Q9NY97 397 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 GPR83Q9NYM4 423 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 GLTPQ9NZD2 209 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 PTTG3PQ9NZH4 202 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 FLRT1Q9NZU1 646 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 GSKIPQ9P0R6 139 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 KCNG2Q9UJ96 466 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 DKKL1Q9UK85 242 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 PLAGL1Q9UM63 463 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 SNX24Q9Y343 169 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 TMEM184BQ9Y519 407 aaPredicted RBP2.82□□□□□ -1.96
PTPRM-204ENST00000577468 PCDHB7Q9Y5E2 793 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 MMP24Q9Y5R2 645 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 CLIC4Q9Y696 253 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 KDM6AO15550 1401 aaPredicted RBP2.82□□□□□ -1.96
PTPRM-204ENST00000577468 DAPK1P53355 1430 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 PRAG1Q86YV5 1406 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 CCDC141Q6ZP82 1450 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 ARAP1Q96P48 1450 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 CDK13Q14004 1512 aaKnown RBP2.82□□□□□ -1.96
PTPRM-204ENST00000577468 DISP1Q96F81 1524 aa2.82□□□□□ -1.96
PTPRM-204ENST00000577468 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.81□□□□□ -1.96
PTPRM-204ENST00000577468 A0A1B0GTW7 788 aa2.81□□□□□ -1.96
PTPRM-204ENST00000577468 A0A1B0GVM2 712 aa2.81□□□□□ -1.96
PTPRM-204ENST00000577468 LINC00862A6NCI5 91 aa2.81□□□□□ -1.96
PTPRM-204ENST00000577468 CCDC160A6NGH7 325 aa2.81□□□□□ -1.96
PTPRM-204ENST00000577468 MANSC4A6NHS7 340 aaPredicted RBP2.81□□□□□ -1.96
PTPRM-204ENST00000577468 AGAP5A6NIR3 686 aa2.81□□□□□ -1.96
PTPRM-204ENST00000577468 FAM90A7PA6NKC0 464 aa2.81□□□□□ -1.96
PTPRM-204ENST00000577468 ANKRD30BLA7E2S9 258 aa2.81□□□□□ -1.96
PTPRM-204ENST00000577468 A8MU76 341 aa2.81□□□□□ -1.96
PTPRM-204ENST00000577468 FAM171A2A8MVW0 826 aa2.81□□□□□ -1.96
PTPRM-204ENST00000577468 HEPACAM2A8MVW5 462 aa2.81□□□□□ -1.96
PTPRM-204ENST00000577468 FAM90A22PA8MWA6 464 aa2.81□□□□□ -1.96
PTPRM-204ENST00000577468 FAM90A12PA8MX19 464 aa2.81□□□□□ -1.96
PTPRM-204ENST00000577468 FAM90A23PA8MXZ1 464 aa2.81□□□□□ -1.96
PTPRM-204ENST00000577468 TMEM233B4DJY2 109 aa2.81□□□□□ -1.96
PTPRM-204ENST00000577468 TRDCB7Z8K6 153 aa2.81□□□□□ -1.96
PTPRM-204ENST00000577468 DISC1C4P0D8 188 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms