RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 KCNK2O95069 426 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 PGM3O95394 542 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 ALOX5P09917 674 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 COX5AP20674 150 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 IMPDH1P20839 514 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 PTNP21246 168 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 IGFBP5P24593 272 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 SHC1P29353 583 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 MAP3K8P41279 467 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 PRIM2P49643 509 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 PRKAG1P54619 331 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 C2orf54Q08AI8 447 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 RASGEF1BQ0VAM2 473 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 SELENBP1Q13228 472 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 UNC50Q53HI1 259 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 FAM120AOSQ5T036 256 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 ZCCHC12Q6PEW1 402 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 LCA5Q86VQ0 697 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 ZNF100Q8IYN0 542 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 COX18Q8N8Q8 333 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 NUP43Q8NFH3 380 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.8□□□□□ -0.52
COPS3-214ENST00000577246 FAM110BQ8TC76 370 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 MRGPRX4Q96LA9 322 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 TMEM237Q96Q45 408 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 PAFAH2Q99487 392 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 PSD2Q9BQI7 771 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 ACTL7BQ9Y614 415 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 FKBP7Q9Y680 259 aa11.8□□□□□ -0.52
COPS3-214ENST00000577246 LOC100289279A0A1B0GTE1 492 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 ZNF724A8MTY0 619 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 E7EQL1 145 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 H3BQF6 201 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 SBK3P0C264 359 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 ATP6V1C1P21283 382 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 ENPP1P22413 925 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 ATP5F1P24539 256 aaPredicted RBP11.79□□□□□ -0.52
COPS3-214ENST00000577246 P2RX1P51575 399 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 RUNX1T1Q06455 604 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 PRSS53Q2L4Q9 553 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 ZNF551Q7Z340 670 aaPredicted RBP11.79□□□□□ -0.52
COPS3-214ENST00000577246 GALNT5Q7Z7M9 940 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 TMEM151AQ8N4L1 468 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 ARIH2OSQ8N7S6 290 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 FBXO27Q8NI29 283 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 PHOSPHO1Q8TCT1 267 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 ZNF764Q96H86 408 aaPredicted RBP11.79□□□□□ -0.52
COPS3-214ENST00000577246 METTL2AQ96IZ6 378 aaKnown RBP11.79□□□□□ -0.52
COPS3-214ENST00000577246 PIMREGQ9BSJ6 248 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 FUT8Q9BYC5 575 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 HOXD1Q9GZZ0 328 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 TSPYL1Q9H0U9 437 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 CXorf36Q9H7Y0 433 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 CHODLQ9H9P2 273 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 FKRPQ9H9S5 495 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 RRAGDQ9NQL2 400 aaPredicted RBP11.79□□□□□ -0.52
COPS3-214ENST00000577246 NPAP1Q9NZP6 1156 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 EMC3Q9P0I2 261 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 NTMQ9P121 344 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 PRSS50Q9UI38 385 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 ZNF180Q9UJW8 692 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 POLR3HQ9Y535 204 aaPredicted RBP11.79□□□□□ -0.52
COPS3-214ENST00000577246 TIMM22Q9Y584 194 aa11.79□□□□□ -0.52
COPS3-214ENST00000577246 CIB4A0PJX0 185 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 TRIM49D1C9J1S8 452 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 CYTIPO60759 359 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 RSL1D1O76021 490 aaKnown RBP11.78□□□□□ -0.52
COPS3-214ENST00000577246 DDX5P17844 614 aaKnown RBP11.78□□□□□ -0.52
COPS3-214ENST00000577246 IGHV1-2P23083 117 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 CD40P25942 277 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 PDLIM4P50479 330 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 POU6F2P78424 691 aaPredicted RBP11.78□□□□□ -0.52
COPS3-214ENST00000577246 ZNF117Q03924 483 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 CD226Q15762 336 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 NOXRED1Q6NXP6 359 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 C3orf33Q6P1S2 294 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 RELL1Q8IUW5 271 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 UBE2J2Q8N2K1 259 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 RFLNBQ8N5W9 214 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 SLC16A11Q8NCK7 471 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 ATP6V1C2Q8NEY4 427 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 JADE3Q92613 823 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 L3HYPDHQ96EM0 354 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 INPP5KQ9BT40 448 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 BTBD2Q9BX70 525 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 COQ10BQ9H8M1 238 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 NINJ2Q9NZG7 142 aa11.78□□□□□ -0.52
COPS3-214ENST00000577246 IGHV3-15A0A0B4J1V0 119 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 ESYT3A0FGR9 886 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 CCT8L1PA6NM43 557 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 GTPBP1O00178 669 aaKnown RBP11.77□□□□□ -0.53
COPS3-214ENST00000577246 TCF21O43680 179 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 KIAA0513O60268 411 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 CRCPO75575 148 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 SNRPAP09012 282 aaKnown RBP11.77□□□□□ -0.53
COPS3-214ENST00000577246 ACP2P11117 423 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 APEHP13798 732 aaKnown RBP11.77□□□□□ -0.53
COPS3-214ENST00000577246 ZNF83P51522 516 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 PRKAA2P54646 552 aa11.77□□□□□ -0.53
COPS3-214ENST00000577246 NAA20P61599 178 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms