RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 C11orf24Q96F05 449 aaPredicted RBP1.92□□□□□ -2.1
COPS3-213ENST00000577210 SDSLQ96GA7 329 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 SH3YL1Q96HL8 342 aaPredicted RBP1.92□□□□□ -2.1
COPS3-213ENST00000577210 PIWIL1Q96J94 861 aaKnown RBP1.92□□□□□ -2.1
COPS3-213ENST00000577210 MAGEB18Q96M61 343 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 KIR2DL4Q99706 377 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 KRTAP4-3Q9BYR4 195 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 CRNKL1Q9BZJ0 848 aaKnown RBP1.92□□□□□ -2.1
COPS3-213ENST00000577210 COMMD4Q9H0A8 199 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 TNFRSF19Q9NS68 423 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 ETNK2Q9NVF9 386 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 NMRK1Q9NWW6 199 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 GNG12Q9UBI6 72 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 PRODH2Q9UF12 536 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 APOBEC3BQ9UH17 382 aaKnown RBP1.92□□□□□ -2.1
COPS3-213ENST00000577210 CTNNA3Q9UI47 895 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 CYTH4Q9UIA0 394 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 PDE10AQ9Y233 779 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 GSTK1Q9Y2Q3 226 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 WDR45Q9Y484 360 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 MAB21L2Q9Y586 359 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 FLVCR1Q9Y5Y0 555 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 DDX49Q9Y6V7 483 aaKnown RBP1.92□□□□□ -2.1
COPS3-213ENST00000577210 SPACA6W5XKT8 324 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 NOTCH3Q9UM47 2321 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 CACNA1FO60840 1977 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 PPIAL4CA0A0B4J2A2 164 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 FAM168BA1KXE4 195 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 MBLAC1A4D2B0 266 aaPredicted RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 ARHGEF35A5YM69 484 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 KLLNB2CW77 178 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 HAT1O14929 419 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 CTAGE5O15320 804 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 STX11O75558 287 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 SERF1AO75920 110 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 IGF1P05019 195 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 WNT2P09544 360 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 PPIAL4GP0DN37 164 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 GCFC2P16383 781 aaKnown RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 ZP3P21754 424 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 CDH5P33151 784 aaPredicted RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 HMGCLP35914 325 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 ACVR1BP36896 505 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 GRIA1P42261 906 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 OR1D4P47884 311 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 ATP5OP48047 213 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 PPT1P50897 306 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 IST1P53990 364 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 RND3P61587 244 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 RPS6P62753 249 aaKnown RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 CCNA1P78396 465 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 IGLV3-21P80748 117 aaPredicted RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 RGS1Q08116 209 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 IL18R1Q13478 541 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 ASAH1Q13510 395 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 CUL2Q13617 745 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 MXD4Q14582 209 aaPredicted RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 IMMTQ16891 758 aaKnown RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 GLYR1Q49A26 553 aaPredicted RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 FILIP1LQ4L180 1135 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 CELF3Q5SZQ8 465 aaKnown RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 SEL1L2Q5TEA6 688 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 TMEM225Q6GV28 225 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 OR5M10Q6IEU7 315 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 OR8G2PQ6IF36 304 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 CCBE1Q6UXH8 406 aaPredicted RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 NANOGNBQ7Z5D8 188 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 NBPF5PQ86XG9 351 aaPredicted RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 STXBP6Q8NFX7 210 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 OR5AU1Q8NGC0 362 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 CCDC26Q8TAB7 109 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 M1APQ8TC57 530 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 MRAPQ8TCY5 172 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 EMG1Q92979 244 aaKnown RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 TMEM80Q96HE8 168 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 CNOT6LQ96LI5 555 aaKnown RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 AMDHD1Q96NU7 426 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 OMDQ99983 421 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 TMEM121Q9BTD3 319 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 TMEM43Q9BTV4 400 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 DPH7Q9BTV6 452 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 NXF5Q9H1B4 397 aaKnown RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 POLR3FQ9H1D9 316 aaPredicted RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 SLC25A51Q9H1U9 297 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 FN3KRPQ9HA64 309 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 APMAPQ9HDC9 416 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 MIEF1Q9NQG6 463 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 NANSQ9NR45 359 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 ZNF275Q9NSD4 429 aaPredicted RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 VNN3Q9NY84 501 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 C6orf203Q9P0P8 240 aaPredicted RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 KLHL21Q9UJP4 597 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 CDH9Q9ULB4 789 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 SAMD4AQ9UPU9 718 aaKnown RBP1.91□□□□□ -2.1
COPS3-213ENST00000577210 MEMO1Q9Y316 297 aa1.91□□□□□ -2.1
COPS3-213ENST00000577210 NSD2O96028 1365 aa1.9□□□□□ -2.11
COPS3-213ENST00000577210 METP08581 1390 aa1.9□□□□□ -2.11
COPS3-213ENST00000577210 TNRQ92752 1358 aa1.9□□□□□ -2.11
COPS3-213ENST00000577210 TRAV26-1A0A087WT03 109 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms