RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 AFMIDQ63HM1 303 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 ENPP7Q6UWV6 458 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 SLCO4C1Q6ZQN7 724 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 ASPGQ86U10 573 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 SDR9C7Q8NEX9 313 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 BPIFA2Q96DR5 249 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 DPEP2Q9H4A9 486 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 MED20Q9H944 212 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 HHATLQ9HCP6 504 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 ACSS1Q9NUB1 689 aaPredicted RBP12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 SIRT5Q9NXA8 310 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 CLEC4EQ9ULY5 219 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 A0A0A6YYJ9 748 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 FAM171A2A8MVW0 826 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 IGLV3-25P01717 112 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 MRPL19P49406 292 aaKnown RBP12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 EXOSC2Q13868 293 aaKnown RBP12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 LEG1Q6P5S2 330 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 TMEM150AQ86TG1 271 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 VRK3Q8IV63 474 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 OR9A2Q8NGT5 310 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 CHTF18Q8WVB6 975 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 SLC6A5Q9Y345 797 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 LCMT2O60294 686 aaKnown RBP12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 TSPAN12O95859 305 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 NAT1P18440 290 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 ATP5A1P25705 553 aaKnown RBP12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 S100A12P80511 92 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 ZNF616Q08AN1 781 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 LMNTD1Q8N9Z9 388 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 LGALS14Q8TCE9 139 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 IGFLR1Q9H665 355 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 SLC6A13Q9NSD5 602 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 IER3IP1Q9Y5U9 82 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 SOCS6O14544 535 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 NPC1O15118 1278 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 B4GALT2O60909 372 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 C1orf105O95561 183 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 HCKP08631 526 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 IGFBP6P24592 240 aaPredicted RBP12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 SGSHP51688 502 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 NRG3P56975 720 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 PFN3P60673 137 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 CYCSP99999 105 aaKnown RBP12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 BEX5Q5H9J7 111 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 UBE2NLQ5JXB2 153 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 TSSK4Q6SA08 328 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 ZNF417Q8TAU3 575 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 PXYLP1Q8TE99 480 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 DCUN1D4Q92564 292 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 NEURL3Q96EH8 262 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 ST6GAL2Q96JF0 529 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 RAD9AQ99638 391 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 SYT17Q9BSW7 474 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 SPHK2Q9NRA0 654 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 C1GALT1Q9NS00 363 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 SHROOM3Q8TF72 1996 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 C11orf98E9PRG8 122 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 DSCR3O14972 297 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 ONECUT3O60422 494 aaPredicted RBP12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 RAB3AP20336 220 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 HSD11B1P28845 292 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 HTR1FP30939 366 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 ZNF169Q14929 603 aaPredicted RBP12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 CLLU1OSQ5K130 101 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 GPR155Q7Z3F1 870 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 RBM45Q8IUH3 476 aaKnown RBP12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 MSRB3Q8IXL7 192 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 OR6T1Q8NGN1 323 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 DUSP19Q8WTR2 217 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 SCARB1Q8WTV0 552 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 KLF16Q9BXK1 252 aaPredicted RBP12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 C20orf85Q9H1P6 137 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 EPHA6Q9UF33 1036 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 BACE2Q9Y5Z0 518 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 RFXAPO00287 272 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 GNRH1P01148 92 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 CSNK1DP48730 415 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 RBMS2Q15434 407 aaKnown RBP12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 LRFN4Q6PJG9 635 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 RFLNAQ6ZTI6 216 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 GATSQ8NAP1 163 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 ZBTB44Q8NCP5 570 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 OR2T4Q8NH00 348 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 PAQR8Q8TEZ7 354 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 MSLNLQ96KJ4 702 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 MS4A4EQ96PG1 132 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 SEC22CQ9BRL7 303 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 MEPEQ9NQ76 525 aaPredicted RBP12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 LTBP3Q9NS15 1303 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 A0A0D9SG52 128 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 GLTPD2A6NH11 291 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 ITGA5P08648 1049 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 TPT1P13693 172 aaKnown RBP12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 CTSOP43234 321 aaPredicted RBP12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 TEAD2Q15562 447 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 RDH10Q8IZV5 341 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 GPR148Q8TDV2 347 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 TBC1D20Q96BZ9 403 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 ORAI3Q9BRQ5 295 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms