RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SERHLQ9NQF3 203 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 MED11Q9P086 117 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 IGKV1-8A0A0C4DH67 115 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 CIB4A0PJX0 185 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 J3QRK9 145 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 KCNK2O95069 426 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 FARS2O95363 451 aaKnown RBP9.35□□□□□ -0.91
SMG6-213ENST00000573166 MED26O95402 600 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 TFAP2AP05549 437 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 ERGP11308 486 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 PCSK6P29122 969 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 CSF2RBP32927 897 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 NPRL3Q12980 569 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 HS3ST5Q8IZT8 346 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 CNOT9Q92600 299 aaKnown RBP9.35□□□□□ -0.91
SMG6-213ENST00000573166 NUDT9Q9BW91 350 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 POLE3Q9NRF9 147 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 OR6C76A6NM76 312 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 ITGA10O75578 1167 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 OR5F1O95221 314 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 ENTPD1P49961 510 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 PHC1P78364 1004 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 COX10Q12887 443 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 CARTPTQ16568 116 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 UGT2A3Q6UWM9 527 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 RNF165Q6ZSG1 346 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 NDUFAF7Q7L592 441 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 LRRC56Q8IYG6 542 aaPredicted RBP9.35□□□□□ -0.91
SMG6-213ENST00000573166 BCORP1Q8N888 145 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 ZNF671Q8TAW3 534 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 IPCEF1Q8WWN9 437 aaPredicted RBP9.35□□□□□ -0.91
SMG6-213ENST00000573166 BPIFA2Q96DR5 249 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 RDH12Q96NR8 316 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 RACGAP1Q9H0H5 632 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 PLGRKTQ9HBL7 147 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 PTTG2Q9NZH5 202 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 ABCG2Q9UNQ0 655 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 TCRBV3S1A0A5B6 114 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 SERTM1A2A2V5 107 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 J3KTA2 159 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 FXYD1O00168 92 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 C8BP07358 591 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 ZNF883P0CG24 379 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 TACR3P29371 465 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 PRKAR1BP31321 381 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 SLC6A9P48067 706 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 EIF2B2P49770 351 aaKnown RBP9.35□□□□□ -0.91
SMG6-213ENST00000573166 VLDLRP98155 873 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 MAP4K2Q12851 820 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 DUSP7Q16829 419 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 DGUOKQ16854 277 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 MICAQ29983 383 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 ARMCX4Q5H9R4 360 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 ARTNQ5T4W7 220 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 LAPTM4BQ86VI4 370 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 OR1N1Q8NGS0 311 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 ZNF501Q96CX3 271 aaPredicted RBP9.35□□□□□ -0.91
SMG6-213ENST00000573166 ADAD1Q96M93 576 aaKnown RBP9.35□□□□□ -0.91
SMG6-213ENST00000573166 ABCD2Q9UBJ2 740 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 MCTS1Q9ULC4 181 aaKnown RBP9.35□□□□□ -0.91
SMG6-213ENST00000573166 TECTAO75443 2155 aa9.35□□□□□ -0.91
SMG6-213ENST00000573166 NDUFB2O95178 105 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 ATP1B1P05026 303 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 ABOP16442 354 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 PSPHP78330 225 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 SGCAQ16586 387 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 UBE3DQ7Z6J8 389 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 RIMKLAQ8IXN7 391 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 ZBTB44Q8NCP5 570 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 OR6T1Q8NGN1 323 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 OR2Y1Q8NGV0 311 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 CT55Q8WUE5 264 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 THEM6Q8WUY1 208 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 UCN3Q969E3 161 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 PCM1Q15154 2024 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 ANKRD36A6QL64 1941 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 LINC00854A0A1B0GVQ3 168 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 A0A1W2PPL8 197 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 SYT5O00445 386 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 ATP6V1G1O75348 118 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 RASAL1O95294 804 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 GNAO1P09471 354 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 NID1P14543 1247 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 SSPNQ14714 243 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 PTGES3Q15185 160 aaKnown RBP9.34□□□□□ -0.91
SMG6-213ENST00000573166 MAPK14Q16539 360 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 ADPRMQ3LIE5 342 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 PODNL1Q6PEZ8 512 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 SPATC1Q76KD6 591 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 UEVLDQ8IX04 471 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 MUS81Q96NY9 551 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 PRR14Q9BWN1 585 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 RAB33BQ9H082 229 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 FBXL4Q9UKA2 621 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 SSR3Q9UNL2 185 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 PCDHGB2Q9Y5G2 931 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 ST14Q9Y5Y6 855 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 LTBP2Q14767 1821 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 H3BNX3 289 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 EIF1AYO14602 144 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms