RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 NEURL3Q96EH8 262 aa15.52■□□□□ 0.08
SMG6-212ENST00000573153 SLC35G5Q96KT7 338 aa15.52■□□□□ 0.08
SMG6-212ENST00000573153 OPN3Q9H1Y3 402 aaPredicted RBP15.52■□□□□ 0.08
SMG6-212ENST00000573153 ST6GALNAC2Q9UJ37 374 aa15.52■□□□□ 0.08
SMG6-212ENST00000573153 DTNAQ9Y4J8 743 aa15.52■□□□□ 0.08
SMG6-212ENST00000573153 H3BNH8 94 aa15.51■□□□□ 0.07
SMG6-212ENST00000573153 FCMRO60667 390 aa15.51■□□□□ 0.07
SMG6-212ENST00000573153 BCAS1O75363 584 aaPredicted RBP15.51■□□□□ 0.07
SMG6-212ENST00000573153 CD8BP10966 210 aa15.51■□□□□ 0.07
SMG6-212ENST00000573153 LOXP28300 417 aaPredicted RBP15.51■□□□□ 0.07
SMG6-212ENST00000573153 S100A3P33764 101 aa15.51■□□□□ 0.07
SMG6-212ENST00000573153 EIF1P41567 113 aaKnown RBP15.51■□□□□ 0.07
SMG6-212ENST00000573153 ZNF41P51814 821 aaPredicted RBP15.51■□□□□ 0.07
SMG6-212ENST00000573153 UFM1P61960 85 aa15.51■□□□□ 0.07
SMG6-212ENST00000573153 RAC1P63000 192 aa15.51■□□□□ 0.07
SMG6-212ENST00000573153 TXNL4AP83876 142 aaKnown RBP15.51■□□□□ 0.07
SMG6-212ENST00000573153 ZNF141Q15928 474 aa15.51■□□□□ 0.07
SMG6-212ENST00000573153 LSRQ86X29 649 aaPredicted RBP15.51■□□□□ 0.07
SMG6-212ENST00000573153 PIWIL2Q8TC59 973 aaKnown RBP15.51■□□□□ 0.07
SMG6-212ENST00000573153 ZNF75CPQ92670 426 aaPredicted RBP15.51■□□□□ 0.07
SMG6-212ENST00000573153 NINJ1Q92982 152 aa15.51■□□□□ 0.07
SMG6-212ENST00000573153 ARL8AQ96BM9 186 aa15.51■□□□□ 0.07
SMG6-212ENST00000573153 ARSGQ96EG1 525 aa15.51■□□□□ 0.07
SMG6-212ENST00000573153 ZNF350Q9GZX5 532 aa15.51■□□□□ 0.07
SMG6-212ENST00000573153 WDR55Q9H6Y2 383 aaPredicted RBP15.51■□□□□ 0.07
SMG6-212ENST00000573153 COQ10BQ9H8M1 238 aa15.51■□□□□ 0.07
SMG6-212ENST00000573153 POLE3Q9NRF9 147 aa15.51■□□□□ 0.07
SMG6-212ENST00000573153 PAQR5Q9NXK6 330 aaPredicted RBP15.51■□□□□ 0.07
SMG6-212ENST00000573153 MARCOQ9UEW3 520 aaPredicted RBP15.51■□□□□ 0.07
SMG6-212ENST00000573153 MED13LQ71F56 2210 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 EIF4E2O60573 245 aaKnown RBP15.5■□□□□ 0.07
SMG6-212ENST00000573153 STX11O75558 287 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 OPN1LWP04000 364 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 PGRP06401 933 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 IDO1P14902 403 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 ELK4P28324 431 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 ADH6P28332 368 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 P2RX1P51575 399 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 RPS3AP61247 264 aaKnown RBP15.5■□□□□ 0.07
SMG6-212ENST00000573153 SIRPAP78324 504 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 FGFBP1Q14512 234 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 MAPK14Q16539 360 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 PDCD4Q53EL6 469 aaKnown RBP15.5■□□□□ 0.07
SMG6-212ENST00000573153 SLC25A53Q5H9E4 307 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 ANKRD46Q86W74 232 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 TOR1AIP2Q8NFQ8 470 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 PHOSPHO1Q8TCT1 267 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 GPR119Q8TDV5 335 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 DACH2Q96NX9 599 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 SRXN1Q9BYN0 137 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 SAP130Q9H0E3 1048 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 TMEM185BQ9H7F4 350 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 CCM2LQ9NUG4 571 aaPredicted RBP15.5■□□□□ 0.07
SMG6-212ENST00000573153 EXD2Q9NVH0 621 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 CARD8Q9Y2G2 431 aa15.5■□□□□ 0.07
SMG6-212ENST00000573153 GOLGA8QA0A0J9YX86 632 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 SH3D21A4FU49 640 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 GOLGA8OA6NCC3 632 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 DEFB108AA8MXU0 73 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 C9JVG2 144 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 GOLGA8NF8WBI6 632 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 EIF1AYO14602 144 aaKnown RBP15.49■□□□□ 0.07
SMG6-212ENST00000573153 CXCL13O43927 109 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 SS18L1O75177 396 aaPredicted RBP15.49■□□□□ 0.07
SMG6-212ENST00000573153 UGT2B17O75795 530 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 GOSR1O95249 250 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 KITP10721 976 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 FCGR2AP12318 317 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 PRKCAP17252 672 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 ART1P52961 327 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 SKP2Q13309 424 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 GSTA3Q16772 222 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 PAMR1Q6UXH9 720 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 FAM214BQ7L5A3 538 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 P4HA3Q7Z4N8 544 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 CNEP1R1Q8N9A8 125 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 ZNF610Q8N9Z0 462 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 FAM71CQ8NEG0 241 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 OR2V1Q8NHB1 315 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 ATP6V1G3Q96LB4 118 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 C7orf26Q96N11 449 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 FOXC2Q99958 501 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 OR51I1Q9H343 314 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 SDR39U1Q9NRG7 319 aaPredicted RBP15.49■□□□□ 0.07
SMG6-212ENST00000573153 PLEKHA6Q9Y2H5 1048 aa15.49■□□□□ 0.07
SMG6-212ENST00000573153 RAI1Q7Z5J4 1906 aaPredicted RBP15.49■□□□□ 0.07
SMG6-212ENST00000573153 TNFSF11O14788 317 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 KIAA0513O60268 411 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 ATE1O95260 518 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 CPSF4O95639 269 aaKnown RBP15.48■□□□□ 0.07
SMG6-212ENST00000573153 CD79BP40259 229 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 MAGEA8P43361 318 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 EIF1AXP47813 144 aaKnown RBP15.48■□□□□ 0.07
SMG6-212ENST00000573153 MRPL19P49406 292 aaKnown RBP15.48■□□□□ 0.07
SMG6-212ENST00000573153 KHKP50053 298 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 CASP9P55211 416 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 SLC9B1Q4ZJI4 515 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 PDZK1Q5T2W1 519 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 MSANTD1Q6ZTZ1 278 aa15.48■□□□□ 0.07
SMG6-212ENST00000573153 ESPNLQ6ZVH7 1005 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms