RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 UTP15Q8TED0 518 aaKnown RBP4.84□□□□□ -1.63
SF3B3-214ENST00000572365 DNAJC9Q8WXX5 260 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 CTNNBL1Q8WYA6 563 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-214ENST00000572365 TANKQ92844 425 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 EFHD2Q96C19 240 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-214ENST00000572365 MTBPQ96DY7 904 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 C3orf30Q96M34 536 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 C12orf66Q96MD2 445 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 QRFPRQ96P65 431 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 TMEM237Q96Q45 408 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 OR1F2PQ96R84 312 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 TSG101Q99816 390 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 PLA2G12AQ9BZM1 189 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 FAM129AQ9BZQ8 928 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 TMBIM4Q9HC24 238 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 LZTFL1Q9NQ48 299 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 IL20Q9NYY1 176 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 SMARCAL1Q9NZC9 954 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 B3GALT5Q9Y2C3 310 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 MRPS2Q9Y399 296 aaKnown RBP4.84□□□□□ -1.63
SF3B3-214ENST00000572365 CCL27Q9Y4X3 112 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 NFS1Q9Y697 457 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 NINQ8N4C6 2090 aa4.84□□□□□ -1.64
SF3B3-214ENST00000572365 YLPM1P49750 1951 aaKnown RBP4.84□□□□□ -1.64
SF3B3-214ENST00000572365 IGLV5-37A0A075B6J1 123 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 IGHV3-20A0A0C4DH32 117 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 A0A0J9YYE9 177 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 CXorf51AA0A1B0GTR3 108 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 A0A1W2PPR1 153 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 PSMD11O00231 422 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 NDC80O14777 642 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 UGT1A9O60656 530 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 KDM4BO94953 1096 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 TRBC1P01850 177 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 UGT1A6P19224 532 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 CHRNB4P30926 498 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 SDC4P31431 198 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 PPP1R2P41236 205 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 NDUFA8P51970 172 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 CTSCP53634 463 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 MTTPP55157 894 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 LINC00205P59089 165 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 XIAPP98170 497 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 RIPPLY1Q0D2K3 151 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 CETN1Q12798 172 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 GAGE2BQ13066 116 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 UBE2V1Q13404 147 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 ZNF260Q3ZCT1 412 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 GAGE2EQ4V326 116 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 HENMT1Q5T8I9 393 aaKnown RBP4.83□□□□□ -1.64
SF3B3-214ENST00000572365 TXNRD3NBQ6F5E7 133 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 KRT80Q6KB66 452 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 GAGE2AQ6NT46 116 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 RHBDD2Q6NTF9 364 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 WDR59Q6PJI9 974 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 TMEM220Q6QAJ8 160 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 PAMR1Q6UXH9 720 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 Q75L30 129 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 COX15Q7KZN9 410 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 GALNTL5Q7Z4T8 443 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 MAP7D3Q8IWC1 876 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 FBXL14Q8N1E6 418 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 C2orf73Q8N5S3 287 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-214ENST00000572365 CPSF7Q8N684 471 aaKnown RBP4.83□□□□□ -1.64
SF3B3-214ENST00000572365 SLC5A8Q8N695 610 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 NKAIN3Q8N8D7 197 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 TMEM35BQ8NCS4 154 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 RBM15BQ8NDT2 890 aaKnown RBP4.83□□□□□ -1.64
SF3B3-214ENST00000572365 TSPAN14Q8NG11 270 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 LINC01560Q8TB33 94 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 SLC44A1Q8WWI5 657 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 SLCO2A1Q92959 643 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 SLC35B4Q969S0 331 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 MCCC1Q96RQ3 725 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-214ENST00000572365 C11orf70Q9BRQ4 267 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 TRIM51Q9BSJ1 452 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 DHX35Q9H5Z1 703 aaKnown RBP4.83□□□□□ -1.64
SF3B3-214ENST00000572365 RNPEPL1Q9HAU8 725 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 UGT1A7Q9HAW7 530 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 UGT1A10Q9HAW8 530 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 UGT1A8Q9HAW9 530 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 CHMP1AQ9HD42 196 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-214ENST00000572365 PPANQ9NQ55 473 aaKnown RBP4.83□□□□□ -1.64
SF3B3-214ENST00000572365 ETNK2Q9NVF9 386 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 PTTG2Q9NZH5 202 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 ZNF224Q9NZL3 707 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 GAGE2DQ9UEU5 116 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 PCSK1NQ9UHG2 260 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 SLC24A2Q9UI40 661 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 OSGIN1Q9UJX0 560 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 DNAJC12Q9UKB3 198 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 AMDHD2Q9Y303 409 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 HYOU1Q9Y4L1 999 aa4.83□□□□□ -1.64
SF3B3-214ENST00000572365 PRR14LQ5THK1 2151 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 NCKAP5O14513 1909 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 NSG1A0A0A6YYJ2 146 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 BICDL2A1A5D9 508 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 OR5H15A6NDH6 313 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 H3BMH7 237 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 GOLGA8TH3BQL2 631 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms